RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 KRT7P08729 469 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 PAFAH1B1P43034 410 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 SSR1P43307 286 aaKnown RBP12.92□□□□□ -0.34
DDB1-209ENST00000537877 MARCKSL1P49006 195 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 TAS2R40P59535 323 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 DUSP4Q13115 394 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 DDR2Q16832 855 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 SLC25A52Q3SY17 297 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 CCDC14Q49A88 953 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 SEL1L2Q5TEA6 688 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 DCAF12L1Q5VU92 463 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 DENND5BQ6ZUT9 1274 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 STRADAQ7RTN6 431 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 ZNF572Q7Z3I7 529 aaPredicted RBP12.92□□□□□ -0.34
DDB1-209ENST00000537877 TMC7Q7Z402 723 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 CREG2Q8IUH2 290 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 KATNAL2Q8IYT4 538 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 DEFB106AQ8N104 65 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 ARHGAP18Q8N392 663 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 RASGEF1CQ8N431 466 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 ACTRT1Q8TDG2 376 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 RPGRIP1Q96KN7 1286 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 CAPZA3Q96KX2 299 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 CFAP57Q96MR6 1250 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 UBE2OQ9C0C9 1292 aaKnown RBP12.92□□□□□ -0.34
DDB1-209ENST00000537877 CRISPLD1Q9H336 500 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 DDX56Q9NY93 547 aaKnown RBP12.92□□□□□ -0.34
DDB1-209ENST00000537877 EHD2Q9NZN4 543 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 TTC7AQ9ULT0 858 aaPredicted RBP12.92□□□□□ -0.34
DDB1-209ENST00000537877 SCML2Q9UQR0 700 aa12.92□□□□□ -0.34
DDB1-209ENST00000537877 PGRMC1O00264 195 aaKnown RBP12.91□□□□□ -0.34
DDB1-209ENST00000537877 CAPN9O14815 690 aa12.91□□□□□ -0.34
DDB1-209ENST00000537877 ZNF185O15231 689 aa12.91□□□□□ -0.34
DDB1-209ENST00000537877 TEX28O15482 410 aa12.91□□□□□ -0.34
DDB1-209ENST00000537877 CEP104O60308 925 aa12.91□□□□□ -0.34
DDB1-209ENST00000537877 ADH1AP07327 375 aa12.91□□□□□ -0.34
DDB1-209ENST00000537877 GPR15P49685 360 aa12.91□□□□□ -0.34
DDB1-209ENST00000537877 SLC25A11Q02978 314 aaKnown RBP12.91□□□□□ -0.34
DDB1-209ENST00000537877 ITIH3Q06033 890 aa12.91□□□□□ -0.34
DDB1-209ENST00000537877 SMC1AQ14683 1233 aaKnown RBP12.91□□□□□ -0.34
DDB1-209ENST00000537877 C15orf59Q2T9L4 293 aaPredicted RBP12.91□□□□□ -0.34
DDB1-209ENST00000537877 SCAMP5Q8TAC9 235 aa12.91□□□□□ -0.34
DDB1-209ENST00000537877 FAM172AQ8WUF8 416 aa12.91□□□□□ -0.34
DDB1-209ENST00000537877 AUTS2Q8WXX7 1259 aa12.91□□□□□ -0.34
DDB1-209ENST00000537877 NDRG1Q92597 394 aaKnown RBP12.91□□□□□ -0.34
DDB1-209ENST00000537877 CENPIQ92674 756 aaPredicted RBP12.91□□□□□ -0.34
DDB1-209ENST00000537877 NT5C3BQ969T7 300 aa12.91□□□□□ -0.34
DDB1-209ENST00000537877 RBM41Q96IZ5 413 aaKnown RBP12.91□□□□□ -0.34
DDB1-209ENST00000537877 TGS1Q96RS0 853 aaKnown RBP12.91□□□□□ -0.34
DDB1-209ENST00000537877 NAP1L3Q99457 506 aaPredicted RBP12.91□□□□□ -0.34
DDB1-209ENST00000537877 NPY6RQ99463 290 aa12.91□□□□□ -0.34
DDB1-209ENST00000537877 C17orf80Q9BSJ5 609 aa12.91□□□□□ -0.34
DDB1-209ENST00000537877 TTLL2Q9BWV7 592 aa12.91□□□□□ -0.34
DDB1-209ENST00000537877 CARD6Q9BX69 1037 aa12.91□□□□□ -0.34
DDB1-209ENST00000537877 NGRNQ9NPE2 291 aaKnown RBP12.91□□□□□ -0.34
DDB1-209ENST00000537877 ENTPD7Q9NQZ7 604 aa12.91□□□□□ -0.34
DDB1-209ENST00000537877 TLR9Q9NR96 1032 aa12.91□□□□□ -0.34
DDB1-209ENST00000537877 ABCC13Q9NSE7 274 aa12.91□□□□□ -0.34
DDB1-209ENST00000537877 SLC27A5Q9Y2P5 690 aa12.91□□□□□ -0.34
DDB1-209ENST00000537877 GREB1Q4ZG55 1949 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.9□□□□□ -0.34
DDB1-209ENST00000537877 CTAGE15A4D2H0 777 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 PRPSAP2O60256 369 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 ENDOD1O94919 500 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 CA3P07451 260 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 CNPP09543 421 aaKnown RBP12.9□□□□□ -0.34
DDB1-209ENST00000537877 CTAGE8P0CG41 777 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 CSH1P0DML2 217 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 CSH2P0DML3 217 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 ATF6P18850 670 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 YWHAQP27348 245 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 MIPP30301 263 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 ELF1P32519 619 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 CA8P35219 290 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 CETN2P41208 172 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 PSEN1P49768 467 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 SULT1E1P49888 294 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 ERVK-21P61565 698 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 YWHAGP61981 247 aaKnown RBP eCLIP12.9□□□□□ -0.34
DDB1-209ENST00000537877 ATP11AP98196 1134 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 RAB30Q15771 203 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 CDO1Q16878 200 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 DCAF6Q58WW2 860 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 SDHAF4Q5VUM1 108 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 DAB2IPQ5VWQ8 1189 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 BSPRYQ5W0U4 402 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 FAM109BQ6ICB4 259 aaPredicted RBP12.9□□□□□ -0.34
DDB1-209ENST00000537877 HFE2Q6ZVN8 426 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 BNIPLQ7Z465 357 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 CTAGE6Q86UF2 777 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 MON1AQ86VX9 555 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 CTAGE4Q8IX94 777 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 TCEAL8Q8IYN2 117 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 ARFGAP1Q8N6T3 406 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 EXD1Q8NHP7 514 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 SPPL3Q8TCT6 385 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 POF1BQ8WVV4 589 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 TEKT4Q8WW24 435 aa12.9□□□□□ -0.34
DDB1-209ENST00000537877 PGAP3Q96FM1 320 aaPredicted RBP12.9□□□□□ -0.34
DDB1-209ENST00000537877 TBCBQ99426 244 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms