RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 PAQR9Q6ZVX9 377 aa18.23■□□□□ 0.51
SNX17-210ENST00000537606 TTC13Q8NBP0 860 aa18.23■□□□□ 0.51
SNX17-210ENST00000537606 TMEM109Q9BVC6 243 aa18.23■□□□□ 0.51
SNX17-210ENST00000537606 DDX43Q9NXZ2 648 aaKnown RBP18.23■□□□□ 0.51
SNX17-210ENST00000537606 DPYSL4O14531 572 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 GPR182O15218 404 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 ENDOD1O94919 500 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 AGTP01019 485 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 RBP3P10745 1247 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 CORO7P57737 925 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 ADIGQ0VDE8 80 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 FASTKD3Q14CZ7 662 aaKnown RBP18.22■□□□□ 0.51
SNX17-210ENST00000537606 CAPN12Q6ZSI9 719 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 KLHDC9Q8NEP7 349 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 TSPAN18Q96SJ8 248 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 MED10Q9BTT4 135 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 SAYSD1Q9NPB0 183 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 BANF1O75531 89 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 SYCP2LQ5T4T6 812 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 CCSAPQ6IQ19 270 aaPredicted RBP18.22■□□□□ 0.51
SNX17-210ENST00000537606 EXOC3L1Q86VI1 746 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 ZCCHC9Q8N567 271 aaKnown RBP18.22■□□□□ 0.51
SNX17-210ENST00000537606 CCHCR1Q8TD31 782 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.22■□□□□ 0.51
SNX17-210ENST00000537606 FAM149B1Q96BN6 582 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 XPO6Q96QU8 1125 aaKnown RBP18.22■□□□□ 0.51
SNX17-210ENST00000537606 PCDH9Q9HC56 1237 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 NOD1Q9Y239 953 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 HEY1Q9Y5J3 304 aa18.22■□□□□ 0.51
SNX17-210ENST00000537606 ALDH1A1P00352 501 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 RPL22P35268 128 aaKnown RBP18.21■□□□□ 0.51
SNX17-210ENST00000537606 MAGEA4P43358 317 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 MAP3K7CLP57077 242 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 SNX16P57768 344 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 RNASEH2BQ5TBB1 312 aaKnown RBP18.21■□□□□ 0.51
SNX17-210ENST00000537606 ANKRD22Q5VYY1 191 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 DSTYKQ6XUX3 929 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 CCDC33Q8N5R6 958 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 HASPINQ8TF76 798 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 P3H4Q92791 437 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 RNF157Q96PX1 679 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 TSPYL1Q9H0U9 437 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 PCDH18Q9HCL0 1135 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 CHST12Q9NRB3 414 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 TBK1Q9UHD2 729 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.21■□□□□ 0.51
SNX17-210ENST00000537606 SYNJ2BP-COX16A0A087WUM0 186 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 MCF2LO15068 1137 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 CTCFP49711 727 aaPredicted RBP18.21■□□□□ 0.51
SNX17-210ENST00000537606 BOLA3Q53S33 107 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 TNFAIP8L3Q5GJ75 292 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 SLC26A9Q7LBE3 791 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 ZDHHC17Q8IUH5 632 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 HNRNPABQ99729 332 aaKnown RBP18.21■□□□□ 0.51
SNX17-210ENST00000537606 DUSP16Q9BY84 665 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 CNOT10Q9H9A5 744 aaKnown RBP18.21■□□□□ 0.51
SNX17-210ENST00000537606 CRTAC1Q9NQ79 661 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 SLC38A7Q9NVC3 462 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 COX16Q9P0S2 106 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 INPP5FQ9Y2H2 1132 aa18.21■□□□□ 0.51
SNX17-210ENST00000537606 MYBPHLA2RUH7 354 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 GABRDO14764 452 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 KIF3CO14782 793 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 PITX1P78337 314 aaPredicted RBP18.2■□□□□ 0.5
SNX17-210ENST00000537606 LPIN1Q14693 890 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 ERMARDQ5T6L9 678 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 DARS2Q6PI48 645 aaKnown RBP18.2■□□□□ 0.5
SNX17-210ENST00000537606 HACE1Q8IYU2 909 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 CYP4X1Q8N118 509 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 SMC1BQ8NDV3 1235 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 PCDH19Q8TAB3 1148 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 TBCBQ99426 244 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 ADAM2Q99965 735 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 DHX35Q9H5Z1 703 aaKnown RBP18.2■□□□□ 0.5
SNX17-210ENST00000537606 TCRBV7S3A2A0A539 114 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 XPO1O14980 1071 aaKnown RBP18.2■□□□□ 0.5
SNX17-210ENST00000537606 TRPA1O75762 1119 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 IFNAR2P48551 515 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 ITGA7Q13683 1181 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 ANKRD20A8PQ5CZ79 823 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 CLEC20AQ6ZU45 233 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 CTU1Q7Z7A3 348 aaKnown RBP18.2■□□□□ 0.5
SNX17-210ENST00000537606 MAP7D3Q8IWC1 876 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 DEFB106AQ8N104 65 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 CCDC185Q8N715 623 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 PQLC3Q8N755 202 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 PLD5Q8N7P1 536 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 MGARPQ8TDB4 240 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 ATXN2LQ8WWM7 1075 aaKnown RBP18.2■□□□□ 0.5
SNX17-210ENST00000537606 HSFY1Q96LI6 401 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 KCNK16Q96T55 309 aa18.2■□□□□ 0.5
SNX17-210ENST00000537606 H7C0C1 242 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 NPR3P17342 541 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 ATP5OP48047 213 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 RPL34P49207 117 aaKnown RBP18.19■□□□□ 0.5
SNX17-210ENST00000537606 ADCY1Q08828 1119 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 LRRC14Q15048 493 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 MFSD5Q6N075 450 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 CD99L2Q8TCZ2 262 aa18.19■□□□□ 0.5
SNX17-210ENST00000537606 ARHGEF2Q92974 986 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms