RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 KCNJ8Q15842 424 aa11.29□□□□□ -0.6
CLSTN3-207ENST00000537408 GJC2Q5T442 439 aaPredicted RBP11.29□□□□□ -0.6
CLSTN3-207ENST00000537408 KRT80Q6KB66 452 aa11.29□□□□□ -0.6
CLSTN3-207ENST00000537408 CLVS1Q8IUQ0 354 aaPredicted RBP11.29□□□□□ -0.6
CLSTN3-207ENST00000537408 ZSWIM1Q9BR11 485 aa11.29□□□□□ -0.6
CLSTN3-207ENST00000537408 MKNK1Q9BUB5 465 aa11.29□□□□□ -0.6
CLSTN3-207ENST00000537408 PARVGQ9HBI0 331 aa11.29□□□□□ -0.6
CLSTN3-207ENST00000537408 DAPK2Q9UIK4 370 aa11.29□□□□□ -0.6
CLSTN3-207ENST00000537408 GPR25O00155 361 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 HNRNPFP52597 415 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 CETN1Q12798 172 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 SLC1A5Q15758 541 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 ARSHQ5FYA8 562 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 MDH1BQ5I0G3 518 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 STXBP4Q6ZWJ1 553 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 VASH1Q7L8A9 365 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 DNAAF5Q86Y56 855 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 GOLM1Q8NBJ4 401 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 RIN3Q8TB24 985 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 ALKBH8Q96BT7 664 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 C9orf72Q96LT7 481 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 MMP19Q99542 508 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 VPS11Q9H270 941 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 LIN28AQ9H9Z2 209 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 LY75O60449 1722 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 GAKO14976 1311 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 ECM29Q5VYK3 1845 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 WTIPA6NIX2 430 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 SYCE1LA8MT33 242 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 TM9SF1O15321 606 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 SORBS3O60504 671 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 FBXO21O94952 628 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 ALOX5P09917 674 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 PRKACBP22694 351 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 TCEA1P23193 301 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 KCNJ1P48048 391 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 GPC3P51654 580 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 MRPS9P82933 396 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 SP4Q02446 784 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 APOFQ13790 326 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 DCAF6Q58WW2 860 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 C12orf60Q5U649 245 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 FBXO11Q86XK2 927 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 SLC13A5Q86YT5 568 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 SOCS4Q8WXH5 440 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 MRRFQ96E11 262 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 GMLQ99445 158 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 WNT8AQ9H1J5 351 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 MOV10Q9HCE1 1003 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 ADAMTS6Q9UKP5 1117 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 PCDHA1Q9Y5I3 950 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 CRTAMO95727 393 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 SLC10A3P09131 477 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 OR52Z1P0C646 297 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 KPNA1P52294 538 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 KCNH2Q12809 1159 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 EIF2B5Q13144 721 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 TRPC3Q13507 836 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 HERC4Q5GLZ8 1057 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 PLEKHH3Q7Z736 793 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 MED30Q96HR3 178 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 KIAA1586Q9HCI6 787 aa11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 PSMC3IPQ9P2W1 217 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-207ENST00000537408 PLEKHA8P1O95397 391 aa11.27□□□□□ -0.6
CLSTN3-207ENST00000537408 RBP3P10745 1247 aa11.27□□□□□ -0.6
CLSTN3-207ENST00000537408 LRRC41Q15345 812 aa11.27□□□□□ -0.6
CLSTN3-207ENST00000537408 TMTC4Q5T4D3 741 aa11.27□□□□□ -0.6
CLSTN3-207ENST00000537408 LZTR1Q8N653 840 aa11.27□□□□□ -0.6
CLSTN3-207ENST00000537408 RNF208Q9H0X6 261 aa11.27□□□□□ -0.6
CLSTN3-207ENST00000537408 C17orf75Q9HAS0 396 aa11.27□□□□□ -0.6
CLSTN3-207ENST00000537408 EPB41L4AQ9HCS5 686 aaPredicted RBP11.27□□□□□ -0.6
CLSTN3-207ENST00000537408 ALG6Q9Y672 507 aa11.27□□□□□ -0.6
CLSTN3-207ENST00000537408 CASZ1Q86V15 1759 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 DDTLA6NHG4 134 aaPredicted RBP11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 CSDE1O75534 798 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 THRAP10827 490 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 MAGEA4P43358 317 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 PLEKHA7Q6IQ23 1121 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 ITIH5Q86UX2 942 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 TDRPQ86YL5 185 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 TMEM47Q9BQJ4 181 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 TEX13BQ9BXU2 312 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 NMUR2Q9GZQ4 415 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 MTIF3Q9H2K0 278 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 SSU72Q9NP77 194 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 KCNK4Q9NYG8 393 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 IFT52Q9Y366 437 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 DNAJA2O60884 412 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 GNRH1P01148 92 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 MYCLP12524 364 aaPredicted RBP11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 P4HA1P13674 534 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 CYP1B1Q16678 543 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 MMAAQ8IVH4 418 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 TRIM59Q8IWR1 403 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 CCDC124Q96CT7 223 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 C1orf21Q9H246 121 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 SLC38A7Q9NVC3 462 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 AGTPBP1Q9UPW5 1226 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 TACC3Q9Y6A5 838 aa11.27□□□□□ -0.61
CLSTN3-207ENST00000537408 ASTN2O75129 1339 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms