RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 STK33Q9BYT3 514 aa13.39□□□□□ -0.27
DDB1-207ENST00000535967 FOXQ1Q9C009 403 aa13.39□□□□□ -0.27
DDB1-207ENST00000535967 ZNF334Q9HCZ1 680 aaPredicted RBP13.39□□□□□ -0.27
DDB1-207ENST00000535967 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.39□□□□□ -0.27
DDB1-207ENST00000535967 ZMYM5Q9UJ78 669 aa13.39□□□□□ -0.27
DDB1-207ENST00000535967 TSPAN16Q9UKR8 245 aa13.39□□□□□ -0.27
DDB1-207ENST00000535967 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.39□□□□□ -0.27
DDB1-207ENST00000535967 MRPS23Q9Y3D9 190 aaKnown RBP13.39□□□□□ -0.27
DDB1-207ENST00000535967 ANHXE9PGG2 379 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 RNF225M0QZC1 329 aaPredicted RBP13.38□□□□□ -0.27
DDB1-207ENST00000535967 CBFA2T2O43439 604 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 MYL4P12829 197 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 LAMP2P13473 410 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 KLK7P49862 253 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 MAP3K7CLP57077 242 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 BPIFB4P59827 614 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 POLR2FP61218 127 aaKnown RBP13.38□□□□□ -0.27
DDB1-207ENST00000535967 PTK2Q05397 1052 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 NR1I3Q14994 352 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 CNGA2Q16280 664 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 SLC5A9Q2M3M2 681 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 SDHAF4Q5VUM1 108 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 FMNL3Q8IVF7 1028 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 FAM71AQ8IYT1 594 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 NUP93Q8N1F7 819 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 RNF214Q8ND24 703 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 ZMIZ2Q8NF64 920 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 IQCDQ96DY2 449 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 NAP1L5Q96NT1 182 aaPredicted RBP13.38□□□□□ -0.27
DDB1-207ENST00000535967 SPAG5Q96R06 1193 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 UBXN6Q9BZV1 441 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 GPR88Q9GZN0 384 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 ARHGEF3Q9NR81 526 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 NUMBLQ9Y6R0 609 aa13.38□□□□□ -0.27
DDB1-207ENST00000535967 MAP1BP46821 2468 aaKnown RBP13.37□□□□□ -0.27
DDB1-207ENST00000535967 NCANO14594 1321 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 SOBPA7XYQ1 873 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 TNFRSF10BO14763 440 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 XPO1O14980 1071 aaKnown RBP13.37□□□□□ -0.27
DDB1-207ENST00000535967 EPHB6O15197 1021 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 THAP12O43422 761 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 SP9P0CG40 484 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 BRD2P25440 801 aaKnown RBP13.37□□□□□ -0.27
DDB1-207ENST00000535967 DDX6P26196 483 aaKnown RBP eCLIP13.37□□□□□ -0.27
DDB1-207ENST00000535967 GABRR2P28476 465 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 USP8P40818 1118 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 PPP3CCP48454 512 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 SLC5A3P53794 718 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 JAM2P57087 298 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 ARHGAP15Q53QZ3 475 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 FIGNQ5HY92 759 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 TTC30AQ86WT1 665 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 NPAS3Q8IXF0 933 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 MAML2Q8IZL2 1156 aaPredicted RBP13.37□□□□□ -0.27
DDB1-207ENST00000535967 PDZD8Q8NEN9 1154 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 OVCA2Q8WZ82 227 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 TFAP2BQ92481 460 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 FGF14Q92915 247 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 SLITRK1Q96PX8 696 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 KCNK16Q96T55 309 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 FBXO44Q9H4M3 255 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 IL21Q9HBE4 155 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 GDE1Q9NZC3 331 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 IFNKQ9P0W0 207 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 CDH7Q9ULB5 785 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 MYO6Q9UM54 1294 aa13.37□□□□□ -0.27
DDB1-207ENST00000535967 MAGED2Q9UNF1 606 aaPredicted RBP13.37□□□□□ -0.27
DDB1-207ENST00000535967 KMT2BQ9UMN6 2715 aaPredicted RBP13.37□□□□□ -0.27
DDB1-207ENST00000535967 A0A1W2PRU2 124 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 FAM92AA1XBS5 289 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 HHLA1C9JL84 531 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 M0QYV0 167 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 FOXN3O00409 490 aaPredicted RBP13.36□□□□□ -0.27
DDB1-207ENST00000535967 CYP26A1O43174 497 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 BEST1O76090 585 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 CEBPBP17676 345 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 PBX1P40424 430 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 CCR2P41597 374 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 PLA2G4AP47712 749 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 PDE6CP51160 858 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 PKDCCQ504Y2 493 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 SARM1Q6SZW1 724 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 PARM1Q6UWI2 310 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 GAREM2Q75VX8 874 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 CACNA2D4Q7Z3S7 1137 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 METTL3Q86U44 580 aaKnown RBP13.36□□□□□ -0.27
DDB1-207ENST00000535967 STKLD1Q8NE28 680 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 ITFG1Q8TB96 612 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 SHKBP1Q8TBC3 707 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 FGF13Q92913 245 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 NLRC4Q9NPP4 1024 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 IL37Q9NZH6 218 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 PCDHGC3Q9UN70 934 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 SIT1Q9Y3P8 196 aa13.36□□□□□ -0.27
DDB1-207ENST00000535967 ITIH6Q6UXX5 1313 aa13.35□□□□□ -0.27
DDB1-207ENST00000535967 MOSPD3O75425 235 aa13.35□□□□□ -0.27
DDB1-207ENST00000535967 F11P03951 625 aa13.35□□□□□ -0.27
DDB1-207ENST00000535967 PFKLP17858 780 aa13.35□□□□□ -0.27
DDB1-207ENST00000535967 YWHAQP27348 245 aa13.35□□□□□ -0.27
DDB1-207ENST00000535967 CLCN1P35523 988 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms