RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 TMEM63AO94886 807 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 KCNE1P15382 129 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 CRYBB1P53674 252 aaPredicted RBP13.95□□□□□ -0.18
VPS33B-202ENST00000535906 HDAC4P56524 1084 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 SF3A3Q12874 501 aaKnown RBP eCLIP13.95□□□□□ -0.18
VPS33B-202ENST00000535906 KRT81Q14533 505 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 TMED2Q15363 201 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 BOLA3Q53S33 107 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 C1orf228Q6PIY5 440 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 C17orf99Q6UX52 265 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 RASAL3Q86YV0 1011 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 ANKRD52Q8NB46 1076 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 SNRNP25Q9BV90 132 aaKnown RBP13.95□□□□□ -0.18
VPS33B-202ENST00000535906 FGFR1OP2Q9NVK5 253 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.95□□□□□ -0.18
VPS33B-202ENST00000535906 USP15Q9Y4E8 981 aaPredicted RBP13.95□□□□□ -0.18
VPS33B-202ENST00000535906 POC1B-GALNT4F8VUJ3 575 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 NDC80O14777 642 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 GTF2A1P52655 376 aaPredicted RBP13.94□□□□□ -0.18
VPS33B-202ENST00000535906 GPX6P59796 221 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 BST2Q10589 180 aaKnown RBP13.94□□□□□ -0.18
VPS33B-202ENST00000535906 TFDP2Q14188 446 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 FSCN1Q16658 493 aaKnown RBP13.94□□□□□ -0.18
VPS33B-202ENST00000535906 FAM47CQ5HY64 1035 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 NUGGCQ68CJ6 796 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 DARS2Q6PI48 645 aaKnown RBP13.94□□□□□ -0.18
VPS33B-202ENST00000535906 PQLC3Q8N755 202 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 PLD5Q8N7P1 536 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 WDR83Q9BRX9 315 aaKnown RBP13.94□□□□□ -0.18
VPS33B-202ENST00000535906 PCDH18Q9HCL0 1135 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 CLUHO75153 1309 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 RASA4BC9J798 803 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 RASA4O43374 803 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 LCP1P13796 627 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 TAF6P49848 677 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 ATXN1P54253 815 aaKnown RBP13.94□□□□□ -0.18
VPS33B-202ENST00000535906 BASP1P80723 227 aaKnown RBP13.94□□□□□ -0.18
VPS33B-202ENST00000535906 PURAQ00577 322 aaKnown RBP13.94□□□□□ -0.18
VPS33B-202ENST00000535906 ROR1Q01973 937 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 PDK2Q15119 407 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 ZDHHC17Q8IUH5 632 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 MAP7D3Q8IWC1 876 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 APPL2Q8NEU8 664 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 PCDH19Q8TAB3 1148 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 SLC2A14Q8TDB8 520 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.94□□□□□ -0.18
VPS33B-202ENST00000535906 TEKT4Q8WW24 435 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 ZNF560Q96MR9 790 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 MAGEB5Q9BZ81 275 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 NKIRAS1Q9NYS0 192 aa13.94□□□□□ -0.18
VPS33B-202ENST00000535906 MYADML2A6NDP7 307 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 SUN1O94901 812 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 MAP3K6O95382 1288 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 IGHA2P01877 340 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 IGFBP6P24592 240 aaPredicted RBP13.93□□□□□ -0.18
VPS33B-202ENST00000535906 SSTR1P30872 391 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 HOXC8P31273 242 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 STIP1P31948 543 aaKnown RBP13.93□□□□□ -0.18
VPS33B-202ENST00000535906 STX2P32856 288 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 BCAT1P54687 386 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 ARL4CP56559 192 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 LILRA4P59901 499 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 NR1H3Q13133 447 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 PPP1R21Q6ZMI0 780 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 LIMS2Q7Z4I7 341 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 TDRPQ86YL5 185 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 PARP9Q8IXQ6 854 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 GDAP1Q8TB36 358 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 MAGEB18Q96M61 343 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 C11orf84Q9BUA3 381 aaPredicted RBP13.93□□□□□ -0.18
VPS33B-202ENST00000535906 SNX25Q9H3E2 840 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 USP29Q9HBJ7 922 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 UBN1Q9NPG3 1134 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 ABCF3Q9NUQ8 709 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 XPO7Q9UIA9 1087 aaKnown RBP13.93□□□□□ -0.18
VPS33B-202ENST00000535906 Q9Y3F1 56 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 BRCA2P51587 3418 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 H7C0C1 242 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 CHUKO15111 745 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 RGS2P41220 211 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 PNPLA4P41247 253 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 ATP5OP48047 213 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 RPL34P49207 117 aaKnown RBP13.93□□□□□ -0.18
VPS33B-202ENST00000535906 SNX16P57768 344 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 SYCP2LQ5T4T6 812 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 TWF2Q6IBS0 349 aaKnown RBP13.93□□□□□ -0.18
VPS33B-202ENST00000535906 SLC26A9Q7LBE3 791 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 FAM228AQ86W67 206 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 NME8Q8N427 588 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 PYROXD1Q8WU10 500 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 MRRFQ96E11 262 aaKnown RBP13.93□□□□□ -0.18
VPS33B-202ENST00000535906 ZFP42Q96MM3 310 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 TGS1Q96RS0 853 aaKnown RBP13.93□□□□□ -0.18
VPS33B-202ENST00000535906 TBCBQ99426 244 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 KATNAL1Q9BW62 490 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 HEY1Q9Y5J3 304 aa13.93□□□□□ -0.18
VPS33B-202ENST00000535906 MANSC4A6NHS7 340 aaPredicted RBP13.92□□□□□ -0.18
VPS33B-202ENST00000535906 MEIS3P2A8K0S8 358 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 E7ESA3 106 aa13.92□□□□□ -0.18
VPS33B-202ENST00000535906 PTGESO14684 152 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms