RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 ARL14EPQ8N8R7 260 aaPredicted RBP12.68□□□□□ -0.38
CHD4-203ENST00000535717 TMEM35BQ8NCS4 154 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 ZNF397Q8NF99 534 aaPredicted RBP12.68□□□□□ -0.38
CHD4-203ENST00000535717 CLEC4CQ8WTT0 213 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 RSPRY1Q96DX4 576 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 PPP1R13BQ96KQ4 1090 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 CPXM1Q96SM3 734 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 PCDHB18PQ96TA0 734 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 AGPAT1Q99943 283 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 KXD1Q9BQD3 176 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 SYT11Q9BT88 431 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 RPP25Q9BUL9 199 aaKnown RBP12.68□□□□□ -0.38
CHD4-203ENST00000535717 MIS12Q9H081 205 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 RNF38Q9H0F5 515 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 SMG9Q9H0W8 520 aaKnown RBP12.68□□□□□ -0.38
CHD4-203ENST00000535717 CCSER2Q9H7U1 834 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 KCNK12Q9HB15 430 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 CYLDQ9NQC7 956 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 CNGB3Q9NQW8 809 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 TJP2Q9UDY2 1190 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 LUC7L2Q9Y383 392 aaKnown RBP12.68□□□□□ -0.38
CHD4-203ENST00000535717 CEP83Q9Y592 693 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 NUMBLQ9Y6R0 609 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 MYO10Q9HD67 2058 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 TRAV19A0A0A6YYK7 116 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 FAM170AA1A519 330 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 YJEFN3A6XGL0 299 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 E5RJQ4 531 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 E7ENQ6 273 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 PAPSS1O43252 624 aaPredicted RBP12.67□□□□□ -0.38
CHD4-203ENST00000535717 COCHO43405 550 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 FBXO21O94952 628 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 CYP1A1P04798 512 aaPredicted RBP12.67□□□□□ -0.38
CHD4-203ENST00000535717 CKMP06732 381 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 PFKLP17858 780 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 HDCP19113 662 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 AVPR1AP37288 418 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 PRKCIP41743 596 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 PSEN1P49768 467 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 TUBP50607 506 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 DAOAP59103 153 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 YWHAGP61981 247 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHD4-203ENST00000535717 NOMO3P69849 1222 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 TRIM14Q14142 442 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 PTPN20Q4JDL3 420 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 HECTD3Q5T447 861 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 NAA35Q5VZE5 725 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 MTSS1LQ765P7 747 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 OLIG1Q8TAK6 271 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 SYN2Q92777 582 aaPredicted RBP12.67□□□□□ -0.38
CHD4-203ENST00000535717 USP13Q92995 863 aaPredicted RBP12.67□□□□□ -0.38
CHD4-203ENST00000535717 MRFAP1L1Q96HT8 127 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 NOX5Q96PH1 765 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 PLA2G2FQ9BZM2 168 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 NUCKS1Q9H1E3 243 aaKnown RBP12.67□□□□□ -0.38
CHD4-203ENST00000535717 ZFP14Q9HCL3 533 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHD4-203ENST00000535717 CLIC5Q9NZA1 410 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 IGSF9Q9P2J2 1179 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 NAGPAQ9UK23 515 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 CCL26Q9Y258 94 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 MUC3AQ02505 3323 aa12.67□□□□□ -0.38
CHD4-203ENST00000535717 NUP210Q8TEM1 1887 aaPredicted RBP12.66□□□□□ -0.38
CHD4-203ENST00000535717 TLR5O60602 858 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 ECI2O75521 394 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 OLFM2O95897 454 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 TBX18O95935 607 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 ERBB2P04626 1255 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 SKILP12757 684 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 RARGP13631 454 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 KLHL30Q0D2K2 578 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 TBX2Q13207 712 aaPredicted RBP12.66□□□□□ -0.38
CHD4-203ENST00000535717 HGSNATQ68CP4 663 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 TRIM72Q6ZMU5 477 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 HFE2Q6ZVN8 426 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 ZNF571Q7Z3V5 609 aaPredicted RBP12.66□□□□□ -0.38
CHD4-203ENST00000535717 TMC6Q7Z403 805 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 ARHGAP18Q8N392 663 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 SLC44A3Q8N4M1 653 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 CPA5Q8WXQ8 436 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 IRGQQ8WZA9 623 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 NXPE3Q969Y0 559 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 ELSPBP1Q96BH3 223 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 LRRC3BQ96PB8 259 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 HAUS4Q9H6D7 363 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 TDP1Q9NUW8 608 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 CUL9Q8IWT3 2517 aa12.66□□□□□ -0.38
CHD4-203ENST00000535717 HEPACAM2A8MVW5 462 aa12.65□□□□□ -0.38
CHD4-203ENST00000535717 UNGP13051 313 aaPredicted RBP12.65□□□□□ -0.38
CHD4-203ENST00000535717 SLC7A9P82251 487 aa12.65□□□□□ -0.38
CHD4-203ENST00000535717 ZXDBP98169 803 aa12.65□□□□□ -0.38
CHD4-203ENST00000535717 GOLGA8FQ08AF8 430 aa12.65□□□□□ -0.38
CHD4-203ENST00000535717 GOLGA8DPQ0D2H9 430 aa12.65□□□□□ -0.38
CHD4-203ENST00000535717 TDGQ13569 410 aa12.65□□□□□ -0.38
CHD4-203ENST00000535717 ZNF268Q14587 947 aaPredicted RBP12.65□□□□□ -0.38
CHD4-203ENST00000535717 CLEC16AQ2KHT3 1053 aa12.65□□□□□ -0.38
CHD4-203ENST00000535717 BSPRYQ5W0U4 402 aa12.65□□□□□ -0.38
CHD4-203ENST00000535717 VITQ6UXI7 678 aa12.65□□□□□ -0.38
CHD4-203ENST00000535717 ERICH1Q86X53 443 aa12.65□□□□□ -0.38
CHD4-203ENST00000535717 ZNF276Q8N554 614 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms