RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 SEMA4CQ9C0C4 833 aa6.1□□□□□ -1.43
PRKDC-205ENST00000535375 HEYLQ9NQ87 328 aaPredicted RBP6.1□□□□□ -1.43
PRKDC-205ENST00000535375 LPAR3Q9UBY5 353 aa6.1□□□□□ -1.43
PRKDC-205ENST00000535375 STEAP1Q9UHE8 339 aa6.1□□□□□ -1.43
PRKDC-205ENST00000535375 HPSEQ9Y251 543 aa6.1□□□□□ -1.43
PRKDC-205ENST00000535375 FER1L4A9Z1Z3 1794 aa6.09□□□□□ -1.43
PRKDC-205ENST00000535375 POM121BA6NF01 834 aa6.09□□□□□ -1.43
PRKDC-205ENST00000535375 KPNA5O15131 536 aa6.09□□□□□ -1.43
PRKDC-205ENST00000535375 TMPRSS11DO60235 418 aa6.09□□□□□ -1.43
PRKDC-205ENST00000535375 CHRM5P08912 532 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-205ENST00000535375 NHLRC4P0CG21 123 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-205ENST00000535375 PSG6Q00889 435 aa6.09□□□□□ -1.43
PRKDC-205ENST00000535375 C4orf46Q504U0 113 aa6.09□□□□□ -1.43
PRKDC-205ENST00000535375 HSP90AB2PQ58FF8 381 aa6.09□□□□□ -1.43
PRKDC-205ENST00000535375 VGLL2Q8N8G2 317 aa6.09□□□□□ -1.43
PRKDC-205ENST00000535375 ATP11CQ8NB49 1132 aa6.09□□□□□ -1.43
PRKDC-205ENST00000535375 CCDC150Q8NCX0 1101 aa6.09□□□□□ -1.43
PRKDC-205ENST00000535375 ADAMTS18Q8TE60 1221 aa6.09□□□□□ -1.43
PRKDC-205ENST00000535375 SLC29A3Q9BZD2 475 aa6.09□□□□□ -1.43
PRKDC-205ENST00000535375 NRIP3Q9NQ35 241 aa6.09□□□□□ -1.43
PRKDC-205ENST00000535375 GEMIN8Q9NWZ8 242 aaKnown RBP6.09□□□□□ -1.43
PRKDC-205ENST00000535375 CAPN11Q9UMQ6 739 aa6.09□□□□□ -1.43
PRKDC-205ENST00000535375 USP1O94782 785 aa6.08□□□□□ -1.44
PRKDC-205ENST00000535375 A1BGP04217 495 aa6.08□□□□□ -1.44
PRKDC-205ENST00000535375 YY1P25490 414 aa6.08□□□□□ -1.44
PRKDC-205ENST00000535375 MPGP29372 298 aa6.08□□□□□ -1.44
PRKDC-205ENST00000535375 NTSR1P30989 418 aa6.08□□□□□ -1.44
PRKDC-205ENST00000535375 ZNF543Q08ER8 600 aa6.08□□□□□ -1.44
PRKDC-205ENST00000535375 LMAN2Q12907 356 aa6.08□□□□□ -1.44
PRKDC-205ENST00000535375 ST3GAL2Q16842 350 aa6.08□□□□□ -1.44
PRKDC-205ENST00000535375 RRAGBQ5VZM2 374 aa6.08□□□□□ -1.44
PRKDC-205ENST00000535375 CLEC9AQ6UXN8 241 aa6.08□□□□□ -1.44
PRKDC-205ENST00000535375 KSR2Q6VAB6 950 aa6.08□□□□□ -1.44
PRKDC-205ENST00000535375 LIX1LQ8IVB5 337 aa6.08□□□□□ -1.44
PRKDC-205ENST00000535375 FSTL5Q8N475 847 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-205ENST00000535375 HS6ST2Q96MM7 605 aa6.08□□□□□ -1.44
PRKDC-205ENST00000535375 CGB1A6NKQ9 187 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 BTBD19C9JJ37 291 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 PPP6CO00743 305 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 SPRY2O43597 315 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 MT-CO3P00414 261 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 TUBB4AP04350 444 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 TRIM27P14373 513 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 KELP23276 732 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 RBL1P28749 1068 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 EPHB2P29323 1055 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 HTRA4P83105 476 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-205ENST00000535375 FAM187BQ17R55 369 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 MANEALQ5VSG8 457 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 MIS18BP1Q6P0N0 1132 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 TMEM65Q6PI78 240 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 CATSPERGQ6ZRH7 1159 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 BCDIN3DQ7Z5W3 292 aaKnown RBP6.07□□□□□ -1.44
PRKDC-205ENST00000535375 CTHRC1Q96CG8 243 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 LRRC46Q96FV0 321 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 RITA1Q96K30 269 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 C5orf34Q96MH7 638 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 TBCBQ99426 244 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 RIMKLBQ9ULI2 386 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 SLC27A6Q9Y2P4 619 aa6.07□□□□□ -1.44
PRKDC-205ENST00000535375 A8MVJ9 347 aa6.06□□□□□ -1.44
PRKDC-205ENST00000535375 TMEM232C9JQI7 657 aa6.06□□□□□ -1.44
PRKDC-205ENST00000535375 AGPSO00116 658 aa6.06□□□□□ -1.44
PRKDC-205ENST00000535375 APAF1O14727 1248 aa6.06□□□□□ -1.44
PRKDC-205ENST00000535375 PRR35P0CG20 571 aa6.06□□□□□ -1.44
PRKDC-205ENST00000535375 LMO1P25800 156 aa6.06□□□□□ -1.44
PRKDC-205ENST00000535375 DIO1P49895 249 aa6.06□□□□□ -1.44
PRKDC-205ENST00000535375 EIF4A1P60842 406 aaKnown RBP6.06□□□□□ -1.44
PRKDC-205ENST00000535375 MTX3Q5HYI7 312 aa6.06□□□□□ -1.44
PRKDC-205ENST00000535375 CEP78Q5JTW2 689 aa6.06□□□□□ -1.44
PRKDC-205ENST00000535375 KLHDC7AQ5VTJ3 777 aa6.06□□□□□ -1.44
PRKDC-205ENST00000535375 BEND5Q7L4P6 421 aa6.06□□□□□ -1.44
PRKDC-205ENST00000535375 YTHDF3Q7Z739 585 aaKnown RBP6.06□□□□□ -1.44
PRKDC-205ENST00000535375 C11orf96Q7Z7L8 435 aa6.06□□□□□ -1.44
PRKDC-205ENST00000535375 ZDHHC12Q96GR4 267 aa6.06□□□□□ -1.44
PRKDC-205ENST00000535375 FAM227BQ96M60 508 aa6.06□□□□□ -1.44
PRKDC-205ENST00000535375 MAGEB5Q9BZ81 275 aa6.06□□□□□ -1.44
PRKDC-205ENST00000535375 SLC25A32Q9H2D1 315 aa6.06□□□□□ -1.44
PRKDC-205ENST00000535375 DNAJC9-AS1A6NH13 148 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 AREL1O15033 823 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 PMM2O15305 246 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 CCNT2O60583 730 aaKnown RBP6.05□□□□□ -1.44
PRKDC-205ENST00000535375 CAND2O75155 1236 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 COQ9O75208 318 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 RNF8O76064 485 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 LATS1O95835 1130 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 KRT18P05783 430 aaKnown RBP6.05□□□□□ -1.44
PRKDC-205ENST00000535375 NBPF7P0C2Y1 421 aaPredicted RBP6.05□□□□□ -1.44
PRKDC-205ENST00000535375 IDEP14735 1019 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 ATICP31939 592 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 STT3AP46977 705 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 PRIM2P49643 509 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 KRTAP1-1Q07627 177 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 CLCA4Q14CN2 919 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 SLC18B1Q6NT16 456 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 ZNF66Q6ZN08 573 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 USP49Q70CQ1 688 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 KRT28Q7Z3Y7 464 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 C16orf71Q8IYS4 520 aaPredicted RBP6.05□□□□□ -1.44
PRKDC-205ENST00000535375 METTL25Q8N6Q8 603 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms