RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ABCA12Q86UK0 2595 aa8.87□□□□□ -0.99
CLIP1-206ENST00000535290 ANKRD17O75179 2603 aaKnown RBP8.86□□□□□ -0.99
CLIP1-206ENST00000535290 KPNA7A9QM74 516 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 PRRT4C9JH25 899 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 E9PMD0 336 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 H0Y8X5 98 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 HOXC11O43248 304 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-206ENST00000535290 OLFM2O95897 454 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 PFKLP17858 780 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 MUTP22033 750 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 GRIK1P39086 918 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 CCT8P50990 548 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 TPMTP51580 245 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 TMPRSS3P57727 454 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 TMEM132DQ14C87 1099 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 INTS6LQ5JSJ4 861 aaKnown RBP8.86□□□□□ -0.99
CLIP1-206ENST00000535290 BTBD8Q5XKL5 378 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 RINT1Q6NUQ1 792 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 C1orf186Q6ZWK4 172 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 METTL3Q86U44 580 aaKnown RBP8.86□□□□□ -0.99
CLIP1-206ENST00000535290 TMEM25Q86YD3 366 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 PDCL2Q8N4E4 241 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 ENGASEQ8NFI3 743 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 MKRN2Q9H000 416 aaKnown RBP8.86□□□□□ -0.99
CLIP1-206ENST00000535290 C17orf75Q9HAS0 396 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 ITM2CQ9NQX7 267 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 DDX19AQ9NUU7 478 aaKnown RBP8.86□□□□□ -0.99
CLIP1-206ENST00000535290 DDX43Q9NXZ2 648 aaKnown RBP8.86□□□□□ -0.99
CLIP1-206ENST00000535290 USP36Q9P275 1121 aaKnown RBP8.86□□□□□ -0.99
CLIP1-206ENST00000535290 ANKRD6Q9Y2G4 727 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 TSC2P49815 1807 aa8.86□□□□□ -0.99
CLIP1-206ENST00000535290 UBR5O95071 2799 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-206ENST00000535290 SCN1AP35498 2009 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 E2F8A0AVK6 867 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 ENC1O14682 589 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 OGTO15294 1046 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 TRAK2O60296 914 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 RFPL3O75679 317 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 CTDNEP1O95476 244 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 ABL1P00519 1130 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 OAS1P00973 400 aaKnown RBP8.85□□□□□ -0.99
CLIP1-206ENST00000535290 PSMA5P28066 241 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 AFF3P51826 1226 aaKnown RBP8.85□□□□□ -0.99
CLIP1-206ENST00000535290 RAD51AP2Q09MP3 1159 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 KYAT1Q16773 422 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 ANO4Q32M45 955 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 FUT11Q495W5 492 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 CFAP221Q4G0U5 840 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 SCARA3Q6AZY7 606 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 SMYD5Q6GMV2 418 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 FBXL19Q6PCT2 694 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 NUDT18Q6ZVK8 323 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 RUFY3Q7L099 469 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 OSTM1Q86WC4 334 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 GATAD2AQ86YP4 633 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 SPATA2LQ8IUW3 424 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-206ENST00000535290 BBS7Q8IWZ6 715 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 CD302Q8IX05 232 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 IGSF8Q969P0 613 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 BICD1Q96G01 975 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 ACBD6Q9BR61 282 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 TRIM9Q9C026 710 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 DPP3Q9NY33 737 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 TBC1D14Q9P2M4 693 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 ANKMY1Q9P2S6 941 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 ORC3Q9UBD5 711 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-206ENST00000535290 CPSF3Q9UKF6 684 aaKnown RBP8.85□□□□□ -0.99
CLIP1-206ENST00000535290 L1RE1Q9UN81 338 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 PCDHB6Q9Y5E3 794 aa8.85□□□□□ -0.99
CLIP1-206ENST00000535290 ANAPC1Q9H1A4 1944 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 A0A0B4J269 797 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 TERTO14746 1132 aaKnown RBP8.84□□□□□ -0.99
CLIP1-206ENST00000535290 ATP2C2O75185 946 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 CDKL5O76039 1030 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 C1SP09871 688 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 OR52Z1P0C646 297 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 MBL2P11226 248 aaPredicted RBP8.84□□□□□ -0.99
CLIP1-206ENST00000535290 PLS3P13797 630 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 FDPSP14324 419 aaKnown RBP8.84□□□□□ -0.99
CLIP1-206ENST00000535290 CDC25AP30304 524 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 ACADVLP49748 655 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 SMTNP53814 917 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 ZNF174Q15697 407 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 PRAMEF14Q5SWL7 426 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 HAUS3Q68CZ6 603 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 GRAMD4Q6IC98 578 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 DIS3L2Q8IYB7 885 aaKnown RBP8.84□□□□□ -0.99
CLIP1-206ENST00000535290 ZNF248Q8NDW4 579 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 SNX19Q92543 992 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 TSC1Q92574 1164 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 WBP2Q969T9 261 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 HIC2Q96JB3 615 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 CNDP2Q96KP4 475 aaKnown RBP8.84□□□□□ -0.99
CLIP1-206ENST00000535290 SPATA17Q96L03 361 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 MSTO1Q9BUK6 570 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 ZSWIM6Q9HCJ5 1215 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 BRMS1Q9HCU9 246 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 TM9SF3Q9HD45 589 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 SPHK2Q9NRA0 654 aa8.84□□□□□ -0.99
CLIP1-206ENST00000535290 DNAJC17Q9NVM6 304 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms