RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 CMTM8Q8IZV2 173 aa13.8□□□□□ -0.2
TMEM258-202ENST00000535042 GJD3Q8N144 294 aa13.8□□□□□ -0.2
TMEM258-202ENST00000535042 SIX6OS1Q8N1H7 587 aa13.8□□□□□ -0.2
TMEM258-202ENST00000535042 SCML4Q8N228 414 aa13.8□□□□□ -0.2
TMEM258-202ENST00000535042 TMEM35BQ8NCS4 154 aa13.8□□□□□ -0.2
TMEM258-202ENST00000535042 SMARCD2Q92925 531 aa13.8□□□□□ -0.2
TMEM258-202ENST00000535042 MRFAP1L1Q96HT8 127 aa13.8□□□□□ -0.2
TMEM258-202ENST00000535042 PPP1R13BQ96KQ4 1090 aa13.8□□□□□ -0.2
TMEM258-202ENST00000535042 LRRC3BQ96PB8 259 aa13.8□□□□□ -0.2
TMEM258-202ENST00000535042 UHRF1Q96T88 793 aaPredicted RBP13.8□□□□□ -0.2
TMEM258-202ENST00000535042 PLA2G2FQ9BZM2 168 aa13.8□□□□□ -0.2
TMEM258-202ENST00000535042 HAUS4Q9H6D7 363 aa13.8□□□□□ -0.2
TMEM258-202ENST00000535042 CCSER2Q9H7U1 834 aa13.8□□□□□ -0.2
TMEM258-202ENST00000535042 CNGB3Q9NQW8 809 aa13.8□□□□□ -0.2
TMEM258-202ENST00000535042 TLR8Q9NR97 1041 aaKnown RBP13.8□□□□□ -0.2
TMEM258-202ENST00000535042 NUDT5Q9UKK9 219 aa13.8□□□□□ -0.2
TMEM258-202ENST00000535042 PATJQ8NI35 1801 aa13.8□□□□□ -0.2
TMEM258-202ENST00000535042 SOBPA7XYQ1 873 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 COCHO43405 550 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 LSM8O95777 96 aaKnown RBP13.79□□□□□ -0.2
TMEM258-202ENST00000535042 OLFM2O95897 454 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 TBX18O95935 607 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 CCDC172P0C7W6 258 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 UNGP13051 313 aaPredicted RBP13.79□□□□□ -0.2
TMEM258-202ENST00000535042 RARGP13631 454 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 HDCP19113 662 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 WEE1P30291 646 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 ACADSBP45954 432 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 YWHAGP61981 247 aaKnown RBP eCLIP13.79□□□□□ -0.2
TMEM258-202ENST00000535042 ZXDBP98169 803 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 TRIM14Q14142 442 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 C2CD6Q53TS8 623 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 RNF135Q8IUD6 432 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 ZNF397Q8NF99 534 aaPredicted RBP13.79□□□□□ -0.2
TMEM258-202ENST00000535042 RIN3Q8TB24 985 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 CPA5Q8WXQ8 436 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 SYN2Q92777 582 aaPredicted RBP13.79□□□□□ -0.2
TMEM258-202ENST00000535042 USP13Q92995 863 aaPredicted RBP13.79□□□□□ -0.2
TMEM258-202ENST00000535042 PIWIL1Q96J94 861 aaKnown RBP13.79□□□□□ -0.2
TMEM258-202ENST00000535042 KXD1Q9BQD3 176 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 KCNK12Q9HB15 430 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 TRPV4Q9HBA0 871 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 CYLDQ9NQC7 956 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.79□□□□□ -0.2
TMEM258-202ENST00000535042 NAGPAQ9UK23 515 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 CCL26Q9Y258 94 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 CEP83Q9Y592 693 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 NUMBLQ9Y6R0 609 aa13.79□□□□□ -0.2
TMEM258-202ENST00000535042 DOCK8Q8NF50 2099 aa13.78□□□□□ -0.2
TMEM258-202ENST00000535042 TRAV19A0A0A6YYK7 116 aa13.78□□□□□ -0.2
TMEM258-202ENST00000535042 DDX3XO00571 662 aaKnown RBP eCLIP13.78□□□□□ -0.29e-41■■■■□ 22.4
TMEM258-202ENST00000535042 MDM4O15151 490 aa13.78□□□□□ -0.2
TMEM258-202ENST00000535042 FBXO21O94952 628 aa13.78□□□□□ -0.2
TMEM258-202ENST00000535042 PLEKP08567 350 aaPredicted RBP13.78□□□□□ -0.2
TMEM258-202ENST00000535042 HNRNPH3P31942 346 aaKnown RBP13.78□□□□□ -0.2
TMEM258-202ENST00000535042 ADKP55263 362 aaKnown RBP13.78□□□□□ -0.2
TMEM258-202ENST00000535042 KLHL30Q0D2K2 578 aa13.78□□□□□ -0.2
TMEM258-202ENST00000535042 ARID5BQ14865 1188 aa13.78□□□□□ -0.2
TMEM258-202ENST00000535042 CLEC16AQ2KHT3 1053 aa13.78□□□□□ -0.2
TMEM258-202ENST00000535042 HECTD3Q5T447 861 aa13.78□□□□□ -0.2
TMEM258-202ENST00000535042 BSPRYQ5W0U4 402 aa13.78□□□□□ -0.2
TMEM258-202ENST00000535042 WDR59Q6PJI9 974 aa13.78□□□□□ -0.2
TMEM258-202ENST00000535042 TRIM72Q6ZMU5 477 aa13.78□□□□□ -0.2
TMEM258-202ENST00000535042 FMNL3Q8IVF7 1028 aa13.78□□□□□ -0.2
TMEM258-202ENST00000535042 SLC30A5Q8TAD4 765 aa13.78□□□□□ -0.2
TMEM258-202ENST00000535042 IRGQQ8WZA9 623 aa13.78□□□□□ -0.2
TMEM258-202ENST00000535042 NUCKS1Q9H1E3 243 aaKnown RBP13.78□□□□□ -0.2
TMEM258-202ENST00000535042 ZFP14Q9HCL3 533 aa13.78□□□□□ -0.2
TMEM258-202ENST00000535042 CLIC5Q9NZA1 410 aa13.78□□□□□ -0.2
TMEM258-202ENST00000535042 HEPACAM2A8MVW5 462 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 TLR5O60602 858 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 MFAP3LO75121 409 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 ADCY5O95622 1261 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 FYNP06241 537 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 CKMP06732 381 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 PFKLP17858 780 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 TNFAIP3P21580 790 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 AVPR1AP37288 418 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 GABRB2P47870 512 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 PSEN1P49768 467 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 TUBP50607 506 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 SLC7A9P82251 487 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 PTP4A2Q12974 167 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 TAF5Q15542 800 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 VITQ6UXI7 678 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 FAM183BPQ6ZVS7 135 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 MTSS1LQ765P7 747 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 ERICH1Q86X53 443 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 ARHGAP18Q8N392 663 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 SLC44A3Q8N4M1 653 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 OR8K1Q8NGG5 319 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 EDEM1Q92611 657 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 KHSRPQ92945 711 aaKnown RBP eCLIP13.77□□□□□ -0.21
TMEM258-202ENST00000535042 ELSPBP1Q96BH3 223 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 NOX5Q96PH1 765 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 DNAJC7Q99615 494 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 SMOC2Q9H3U7 446 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 TDP1Q9NUW8 608 aa13.77□□□□□ -0.21
TMEM258-202ENST00000535042 SEPT11Q9NVA2 429 aaKnown RBP13.77□□□□□ -0.21
TMEM258-202ENST00000535042 SMPD4Q9NXE4 827 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms