RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 PSEN1P49768 467 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 MRPS21P82921 87 aaKnown RBP14.15□□□□□ -0.14
CAPN1-228ENST00000534373 GAD2Q05329 585 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 ORC1Q13415 861 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 GAB4Q2WGN9 574 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 HSF5Q4G112 596 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-228ENST00000534373 NAIF1Q69YI7 327 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-228ENST00000534373 HTR3DQ70Z44 454 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 CACNA2D4Q7Z3S7 1137 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.15□□□□□ -0.14
CAPN1-228ENST00000534373 TWNKQ96RR1 684 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 PNKPQ96T60 521 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 DUSP16Q9BY84 665 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 UBXN6Q9BZV1 441 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 NACA2Q9H009 215 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 CCSER2Q9H7U1 834 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 MMRN2Q9H8L6 949 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 CYLDQ9NQC7 956 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 USP18Q9UMW8 372 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 COQ4Q9Y3A0 265 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 SH3BP1Q9Y3L3 701 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 DNAH14Q0VDD8 3507 aa14.15□□□□□ -0.14
CAPN1-228ENST00000534373 DMXL1Q9Y485 3027 aa14.15□□□□□ -0.15
CAPN1-228ENST00000534373 AXIN1O15169 862 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 RPP40O75818 363 aaKnown RBP14.14□□□□□ -0.15
CAPN1-228ENST00000534373 APBB3O95704 486 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 ADH5P11766 374 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 CD58P19256 250 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 ADORA2BP29275 332 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 GOLGA8FQ08AF8 430 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 GOLGA8DPQ0D2H9 430 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 SPEM2Q0P670 501 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 SRSF5Q13243 272 aaKnown RBP14.14□□□□□ -0.15
CAPN1-228ENST00000534373 STIM1Q13586 685 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 DMC1Q14565 340 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 CSRP2Q16527 193 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 LPAL2Q16609 132 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 RSPO4Q2I0M5 234 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-228ENST00000534373 ANKRD40Q6AI12 368 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 DGLUCYQ7Z3D6 616 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 TADA2BQ86TJ2 420 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 FAM160A2Q8N612 972 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-228ENST00000534373 KCNV2Q8TDN2 545 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 USP33Q8TEY7 942 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 SEMA4DQ92854 862 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 EEF2KMTQ96G04 330 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 DHTKD1Q96HY7 919 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-228ENST00000534373 ZC3H10Q96K80 434 aaKnown RBP14.14□□□□□ -0.15
CAPN1-228ENST00000534373 HEXIM2Q96MH2 286 aaKnown RBP14.14□□□□□ -0.15
CAPN1-228ENST00000534373 METTL14Q9HCE5 456 aaKnown RBP14.14□□□□□ -0.15
CAPN1-228ENST00000534373 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.14□□□□□ -0.152e-14■■■■■ 49.7
CAPN1-228ENST00000534373 CISHQ9NSE2 258 aa14.14□□□□□ -0.15
CAPN1-228ENST00000534373 PSMA7O14818 248 aa14.13□□□□□ -0.15
CAPN1-228ENST00000534373 HOXC11O43248 304 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-228ENST00000534373 KAT7O95251 611 aa14.13□□□□□ -0.15
CAPN1-228ENST00000534373 APODP05090 189 aa14.13□□□□□ -0.15
CAPN1-228ENST00000534373 CCDC192P0DO97 292 aa14.13□□□□□ -0.15
CAPN1-228ENST00000534373 ACO1P21399 889 aaKnown RBP14.13□□□□□ -0.15
CAPN1-228ENST00000534373 GRIA2P42262 883 aa14.13□□□□□ -0.15
CAPN1-228ENST00000534373 TNFRSF4P43489 277 aa14.13□□□□□ -0.15
CAPN1-228ENST00000534373 KIF11P52732 1056 aa14.13□□□□□ -0.15
CAPN1-228ENST00000534373 LY6G5CQ5SRR4 150 aa14.13□□□□□ -0.15
CAPN1-228ENST00000534373 PPP1R26Q5T8A7 1209 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-228ENST00000534373 BTBD8Q5XKL5 378 aa14.13□□□□□ -0.15
CAPN1-228ENST00000534373 FOXR2Q6PJQ5 311 aa14.13□□□□□ -0.15
CAPN1-228ENST00000534373 NUDT18Q6ZVK8 323 aa14.13□□□□□ -0.15
CAPN1-228ENST00000534373 CCDC186Q7Z3E2 898 aa14.13□□□□□ -0.15
CAPN1-228ENST00000534373 TMEM176AQ96HP8 235 aa14.13□□□□□ -0.15
CAPN1-228ENST00000534373 CDK5RAP1Q96SZ6 601 aaKnown RBP14.13□□□□□ -0.15
CAPN1-228ENST00000534373 KLF16Q9BXK1 252 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-228ENST00000534373 PARD6AQ9NPB6 346 aa14.13□□□□□ -0.15
CAPN1-228ENST00000534373 SPHK2Q9NRA0 654 aa14.13□□□□□ -0.15
CAPN1-228ENST00000534373 SEMA4GQ9NTN9 838 aa14.13□□□□□ -0.15
CAPN1-228ENST00000534373 CLIC5Q9NZA1 410 aa14.13□□□□□ -0.15
CAPN1-228ENST00000534373 ARMCX3Q9UH62 379 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-228ENST00000534373 USP3Q9Y6I4 520 aa14.13□□□□□ -0.15
CAPN1-228ENST00000534373 ATG2BQ96BY7 2078 aa14.12□□□□□ -0.15
CAPN1-228ENST00000534373 PMM2O15305 246 aa14.12□□□□□ -0.15
CAPN1-228ENST00000534373 HOXC13P31276 330 aa14.12□□□□□ -0.15
CAPN1-228ENST00000534373 PLA2G4AP47712 749 aa14.12□□□□□ -0.15
CAPN1-228ENST00000534373 PXNP49023 591 aaPredicted RBP14.12□□□□□ -0.15
CAPN1-228ENST00000534373 DGKEP52429 567 aa14.12□□□□□ -0.15
CAPN1-228ENST00000534373 RAD23BP54727 409 aa14.12□□□□□ -0.15
CAPN1-228ENST00000534373 SLC8A3P57103 927 aa14.12□□□□□ -0.15
CAPN1-228ENST00000534373 TCERG1LQ5VWI1 586 aa14.12□□□□□ -0.15
CAPN1-228ENST00000534373 ARHGAP17Q68EM7 881 aa14.12□□□□□ -0.15
CAPN1-228ENST00000534373 C11orf74Q86VG3 221 aa14.12□□□□□ -0.15
CAPN1-228ENST00000534373 CEP63Q96MT8 703 aa14.12□□□□□ -0.15
CAPN1-228ENST00000534373 RTKNQ9BST9 563 aa14.12□□□□□ -0.15
CAPN1-228ENST00000534373 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.12□□□□□ -0.15
CAPN1-228ENST00000534373 DNMT3LQ9UJW3 386 aa14.12□□□□□ -0.15
CAPN1-228ENST00000534373 LSM7Q9UK45 103 aaKnown RBP14.12□□□□□ -0.15
CAPN1-228ENST00000534373 MMP17Q9ULZ9 603 aa14.12□□□□□ -0.15
CAPN1-228ENST00000534373 PCDHGA5Q9Y5G8 931 aa14.12□□□□□ -0.15
CAPN1-228ENST00000534373 CEP250Q9BV73 2442 aa14.12□□□□□ -0.15
CAPN1-228ENST00000534373 MYH10P35580 1976 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 GREM1O60565 184 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 TBX18O95935 607 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 RALAP11233 206 aa14.11□□□□□ -0.15
CAPN1-228ENST00000534373 RARGP13631 454 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms