RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	PROSER3	Q2NL68	480 aa		4.1	□□□□□ -1.75
RDX-215	ENST00000533961	FAM209B	Q5JX69	171 aa		4.1	□□□□□ -1.75
RDX-215	ENST00000533961	FCRL6	Q6DN72	434 aa		4.1	□□□□□ -1.75
RDX-215	ENST00000533961	GGT6	Q6P531	493 aa		4.1	□□□□□ -1.75
RDX-215	ENST00000533961	KRT78	Q8N1N4	520 aa		4.1	□□□□□ -1.75
RDX-215	ENST00000533961	LRRC71	Q8N4P6	559 aa		4.1	□□□□□ -1.75
RDX-215	ENST00000533961	RNF152	Q8N8N0	203 aa		4.1	□□□□□ -1.75
RDX-215	ENST00000533961	OSCP1	Q8WVF1	389 aa		4.1	□□□□□ -1.75
RDX-215	ENST00000533961	GLG1	Q92896	1179 aa		4.1	□□□□□ -1.75
RDX-215	ENST00000533961	SPSB4	Q96A44	273 aa		4.1	□□□□□ -1.75
RDX-215	ENST00000533961	NMD3	Q96D46	503 aa	Known RBP	4.1	□□□□□ -1.75
RDX-215	ENST00000533961	REPS1	Q96D71	796 aa		4.1	□□□□□ -1.75
RDX-215	ENST00000533961	ZNF48	Q96MX3	618 aa	Predicted RBP	4.1	□□□□□ -1.75
RDX-215	ENST00000533961	ZCWPW1	Q9H0M4	648 aa		4.1	□□□□□ -1.75
RDX-215	ENST00000533961	NRIP3	Q9NQ35	241 aa		4.1	□□□□□ -1.75
RDX-215	ENST00000533961	TRIM36	Q9NQ86	728 aa		4.1	□□□□□ -1.75
RDX-215	ENST00000533961	A1CF	Q9NQ94	594 aa	Known RBP	4.1	□□□□□ -1.75
RDX-215	ENST00000533961	ADAMTS5	Q9UNA0	930 aa		4.1	□□□□□ -1.75
RDX-215	ENST00000533961	ZNF521	Q96K83	1311 aa		4.1	□□□□□ -1.75
RDX-215	ENST00000533961	UBE2Q2L	H0YL09	131 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	APOL1	O14791	398 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	CCP110	O43303	1012 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	RGS10	O43665	173 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	RRP9	O43818	475 aa	Known RBP	4.09	□□□□□ -1.75
RDX-215	ENST00000533961	PDE8B	O95263	885 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	RPL17	P18621	184 aa	Known RBP	4.09	□□□□□ -1.75
RDX-215	ENST00000533961	CERKL	Q49MI3	558 aa	Predicted RBP	4.09	□□□□□ -1.75
RDX-215	ENST00000533961	PCID2	Q5JVF3	399 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	CERCAM	Q5T4B2	595 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	MORN5	Q5VZ52	161 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	SLC9A4	Q6AI14	798 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	KRTAP5-1	Q6L8H4	278 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	TRIM72	Q6ZMU5	477 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	USP49	Q70CQ1	688 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	NEK8	Q86SG6	692 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	C11orf44	Q8N8P7	122 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	RPL36AL	Q969Q0	106 aa	Known RBP	4.09	□□□□□ -1.75
RDX-215	ENST00000533961	DAZAP1	Q96EP5	407 aa	Known RBP	4.09	□□□□□ -1.75
RDX-215	ENST00000533961	SLC39A13	Q96H72	371 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	CCDC138	Q96M89	665 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	STRBP	Q96SI9	672 aa	Known RBP	4.09	□□□□□ -1.75
RDX-215	ENST00000533961	MACROD1	Q9BQ69	325 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	PNPLA8	Q9NP80	782 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	GEMIN8	Q9NWZ8	242 aa	Known RBP	4.09	□□□□□ -1.75
RDX-215	ENST00000533961	TFCP2L1	Q9NZI6	479 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	ZNF212	Q9UDV6	495 aa		4.09	□□□□□ -1.75
RDX-215	ENST00000533961	CACNA1I	Q9P0X4	2223 aa		4.09	□□□□□ -1.76
RDX-215	ENST00000533961	ANO9	A1A5B4	782 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.08	□□□□□ -1.76
RDX-215	ENST00000533961	MBD3L3	A6NE82	208 aa	Predicted RBP	4.08	□□□□□ -1.76
RDX-215	ENST00000533961	BTBD19	C9JJ37	291 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	POC1B-GALNT4	F8VUJ3	575 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	PSMD9	O00233	223 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	ZNF213	O14771	459 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	USP1	O94782	785 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	INMT	O95050	263 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	IL18RAP	O95256	599 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	NTN1	O95631	604 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	IFIT2	P09913	472 aa	Known RBP	4.08	□□□□□ -1.76
RDX-215	ENST00000533961	TXN	P10599	105 aa	Known RBP	4.08	□□□□□ -1.76
RDX-215	ENST00000533961	KEL	P23276	732 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	KLRC1	P26715	233 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	ACVR2A	P27037	513 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	PDE1A	P54750	535 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	RHBDL3	P58872	404 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	SUMO2	P61956	95 aa	Known RBP	4.08	□□□□□ -1.76
RDX-215	ENST00000533961	IFIT5	Q13325	482 aa	Known RBP	4.08	□□□□□ -1.76
RDX-215	ENST00000533961	CCNI	Q14094	377 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	NPY5R	Q15761	445 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	SLC35G1	Q2M3R5	365 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	CRTC1	Q6UUV9	634 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961		Q6ZWC4	215 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	MORC1	Q86VD1	984 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	SFTPA1	Q8IWL2	248 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	ABRA	Q8N0Z2	381 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	GALNT4	Q8N4A0	578 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	OR2C3	Q8N628	320 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	VGLL2	Q8N8G2	317 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	XAGE5	Q8WWM1	108 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	ZNF668	Q96K58	619 aa	Predicted RBP	4.08	□□□□□ -1.76
RDX-215	ENST00000533961	SNX18	Q96RF0	628 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	PPP1R9B	Q96SB3	815 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	C17orf80	Q9BSJ5	609 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	THAP7	Q9BT49	309 aa	Predicted RBP	4.08	□□□□□ -1.76
RDX-215	ENST00000533961	BTBD1	Q9H0C5	482 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	DHX36	Q9H2U1	1008 aa	Known RBP	4.08	□□□□□ -1.76
RDX-215	ENST00000533961	CERS4	Q9HA82	394 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	DNMT3B	Q9UBC3	853 aa	Known RBP	4.08	□□□□□ -1.76
RDX-215	ENST00000533961	SERGEF	Q9UGK8	458 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	TAGLN3	Q9UI15	199 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	CDY1	Q9Y6F8	540 aa		4.08	□□□□□ -1.76
RDX-215	ENST00000533961	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.07	□□□□□ -1.76
RDX-215	ENST00000533961	LOC102723971	A0A1B0GUV8	181 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	RASA4B	C9J798	803 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	PPP6C	O00743	305 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	RASA4	O43374	803 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	PIAS2	O75928	621 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	MYL4	P12829	197 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	ENG	P17813	658 aa		4.07	□□□□□ -1.76
RDX-215	ENST00000533961	BTF3	P20290	206 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms