RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 MYH10P35580 1976 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 HELZP42694 1942 aaKnown RBP13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 A0A0A0MRY4 1105 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 CETN3O15182 167 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 BEST1O76090 585 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 RHOBTB1O94844 696 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 APODP05090 189 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 TRIM49P0CI25 452 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 TRIM49CP0CI26 452 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 ADH5P11766 374 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 ADORA2BP29275 332 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 SEC13P55735 322 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 MRPS21P82921 87 aaKnown RBP13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 GAD2Q05329 585 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 PPP3CAQ08209 521 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 USP39Q53GS9 565 aaKnown RBP13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 BTBD8Q5XKL5 378 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 KRT39Q6A163 491 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 NUDT18Q6ZVK8 323 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 KBTBD6Q86V97 674 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 TTC39CQ8N584 583 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 ZMIZ2Q8NF64 920 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 TSTD1Q8NFU3 115 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 TAS1R2Q8TE23 839 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 USP33Q8TEY7 942 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 DUSP9Q99956 384 aaKnown RBP13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 NIF3L1Q9GZT8 377 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 ARRDC1-AS1Q9H2J1 176 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 MMRN2Q9H8L6 949 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 GDPD2Q9HCC8 539 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 PNPLA8Q9NP80 782 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 HMGXB4Q9UGU5 601 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 SCML2Q9UQR0 700 aa13.12□□□□□ -0.31
CAPRIN1-213ENST00000533562 MED19A0JLT2 244 aaPredicted RBP13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 SCAMP3O14828 347 aaKnown RBP13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 TLR5O60602 858 aa13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 KAT7O95251 611 aa13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 ZNF806P0C7X5 589 aa13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 EPB41P11171 864 aaKnown RBP13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 CD58P19256 250 aa13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 ATP5C1P36542 298 aaKnown RBP13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 GRIA2P42262 883 aa13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 TNFRSF4P43489 277 aa13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 SLC6A11P48066 632 aa13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 DGKEP52429 567 aa13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 MCCD1P59942 119 aaPredicted RBP13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 GOLGA8FQ08AF8 430 aa13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 GOLGA8DPQ0D2H9 430 aa13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 ELF2Q15723 593 aa13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 GAB4Q2WGN9 574 aa13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 HSF5Q4G112 596 aaPredicted RBP13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 ZCWPW2Q504Y3 356 aa13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 LY6G5CQ5SRR4 150 aa13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 C11orf74Q86VG3 221 aa13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 ZFRQ96KR1 1074 aaKnown RBP13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 GSDMAQ96QA5 445 aa13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 GTPBP4Q9BZE4 634 aaKnown RBP13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 APOBEC3GQ9HC16 384 aaKnown RBP13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 HOOK1Q9UJC3 728 aaKnown RBP13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 PCDHGA5Q9Y5G8 931 aa13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 PCDHA5Q9Y5H7 936 aa13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 MYOFQ9NZM1 2061 aa13.11□□□□□ -0.31
CAPRIN1-213ENST00000533562 TBC1D3BA6NDS4 549 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 SLC30A4O14863 429 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 CILPO75339 1184 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 ALDH1A2O94788 518 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 EPN2O95208 641 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 SMC2O95347 1197 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 ACO1P21399 889 aaKnown RBP13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 NUCB2P80303 420 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 PNOCQ13519 176 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 CRY1Q16526 586 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 PLK5Q496M5 336 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 CLEC20AQ6ZU45 233 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 HTR3DQ70Z44 454 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 TADA2BQ86TJ2 420 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 SMYD4Q8IYR2 804 aaPredicted RBP13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 FMR1NBQ8N0W7 255 aaPredicted RBP13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 CCDC33Q8N5R6 958 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 C12orf50Q8NA57 414 aaPredicted RBP13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 FBXL13Q8NEE6 735 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 KCNV2Q8TDN2 545 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 HEXIM2Q96MH2 286 aaKnown RBP13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 TWNKQ96RR1 684 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 TSG101Q99816 390 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 DUSP16Q9BY84 665 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 FAM124BQ9H5Z6 455 aaPredicted RBP13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 ARHGEF4Q9NR80 690 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 SPHK2Q9NRA0 654 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 RAB20Q9NX57 234 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 DEC1Q9P2X7 70 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 MMP17Q9ULZ9 603 aa13.1□□□□□ -0.31
CAPRIN1-213ENST00000533562 DCDC2BA2VCK2 349 aa13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 HOXC11O43248 304 aaPredicted RBP13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 TBX18O95935 607 aa13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 IRF1P10914 325 aa13.09□□□□□ -0.31
CAPRIN1-213ENST00000533562 PRCPP42785 496 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms