RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 RPGRIP1Q96KN7 1286 aa18.33■□□□□ 0.52
NXF1-216ENST00000533499 NMUR1Q9HB89 426 aa18.33■□□□□ 0.52
NXF1-216ENST00000533499 CYLDQ9NQC7 956 aa18.33■□□□□ 0.52
NXF1-216ENST00000533499 IL37Q9NZH6 218 aa18.33■□□□□ 0.52
NXF1-216ENST00000533499 NUDT5Q9UKK9 219 aa18.33■□□□□ 0.52
NXF1-216ENST00000533499 USP3Q9Y6I4 520 aa18.33■□□□□ 0.52
NXF1-216ENST00000533499 A0A087X0T9 212 aa18.32■□□□□ 0.52
NXF1-216ENST00000533499 ZNF840PA6NDX5 716 aa18.32■□□□□ 0.52
NXF1-216ENST00000533499 YJEFN3A6XGL0 299 aa18.32■□□□□ 0.52
NXF1-216ENST00000533499 E7ENQ6 273 aa18.32■□□□□ 0.52
NXF1-216ENST00000533499 TADA3O75528 432 aa18.32■□□□□ 0.52
NXF1-216ENST00000533499 GRAP2O75791 330 aa18.32■□□□□ 0.52
NXF1-216ENST00000533499 FTLP02792 175 aaPredicted RBP18.32■□□□□ 0.52
NXF1-216ENST00000533499 FAM228BP0C875 321 aa18.32■□□□□ 0.52
NXF1-216ENST00000533499 RALAP11233 206 aa18.32■□□□□ 0.52
NXF1-216ENST00000533499 PPP3CCP48454 512 aa18.32■□□□□ 0.52
NXF1-216ENST00000533499 PGFP49763 221 aa18.32■□□□□ 0.52
NXF1-216ENST00000533499 RNASE9P60153 205 aaKnown RBP18.32■□□□□ 0.52
NXF1-216ENST00000533499 MRPS5P82675 430 aaKnown RBP18.32■□□□□ 0.52
NXF1-216ENST00000533499 CENPCQ03188 943 aa18.32■□□□□ 0.52
NXF1-216ENST00000533499 PUS10Q3MIT2 529 aaKnown RBP18.32■□□□□ 0.52
NXF1-216ENST00000533499 TOGARAM2Q6ZUX3 1019 aa18.32■□□□□ 0.52
NXF1-216ENST00000533499 TMEM150AQ86TG1 271 aa18.32■□□□□ 0.52
NXF1-216ENST00000533499 MON1AQ86VX9 555 aa18.32■□□□□ 0.52
NXF1-216ENST00000533499 ARHGAP18Q8N392 663 aa18.32■□□□□ 0.52
NXF1-216ENST00000533499 EDEM1Q92611 657 aa18.32■□□□□ 0.52
NXF1-216ENST00000533499 FGF13Q92913 245 aa18.32■□□□□ 0.52
NXF1-216ENST00000533499 SPTLC3Q9NUV7 552 aa18.32■□□□□ 0.52
NXF1-216ENST00000533499 SSU72P8A0A1W2PR75 194 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 C2orf78A6NCI8 922 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 CAPN9O14815 690 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 SART1O43290 800 aaKnown RBP18.31■□□□□ 0.52
NXF1-216ENST00000533499 RTN2O75298 545 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 MOSPD3O75425 235 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 PAPLNO95428 1278 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 CALB1P05937 261 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 CKMP06732 381 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 RARGP13631 454 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 ABCB4P21439 1286 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 MMP8P22894 467 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 C10orf120Q5SQS8 335 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 HECTD3Q5T447 861 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 FAM102AQ5T9C2 384 aaPredicted RBP18.31■□□□□ 0.52
NXF1-216ENST00000533499 BSPRYQ5W0U4 402 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 PM20D1Q6GTS8 502 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 HFE2Q6ZVN8 426 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 OTOP3Q7RTS5 596 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 SCD5Q86SK9 330 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 PHF13Q86YI8 300 aaPredicted RBP18.31■□□□□ 0.52
NXF1-216ENST00000533499 NPAS3Q8IXF0 933 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 RNF139Q8WU17 664 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 OVCA2Q8WZ82 227 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 ACSF2Q96CM8 615 aaPredicted RBP18.31■□□□□ 0.52
NXF1-216ENST00000533499 MYADMQ96S97 322 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 BAG1Q99933 345 aaPredicted RBP18.31■□□□□ 0.52
NXF1-216ENST00000533499 CCSER2Q9H7U1 834 aa18.31■□□□□ 0.52
NXF1-216ENST00000533499 AVENQ9NQS1 362 aaPredicted RBP18.31■□□□□ 0.52
NXF1-216ENST00000533499 TRAV19A0A0A6YYK7 116 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 FAM92AA1XBS5 289 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 LTFP02788 710 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 MBL2P11226 248 aaPredicted RBP18.3■□□□□ 0.52
NXF1-216ENST00000533499 HDCP19113 662 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 AVPR1AP37288 418 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 RPL34P49207 117 aaKnown RBP18.3■□□□□ 0.52
NXF1-216ENST00000533499 PSEN1P49768 467 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 CDK17Q00537 523 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 SLC6A3Q01959 620 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 MAPK8IP2Q13387 824 aaPredicted RBP18.3■□□□□ 0.52
NXF1-216ENST00000533499 TAF5Q15542 800 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 SMAD2Q15796 467 aaKnown RBP18.3■□□□□ 0.52
NXF1-216ENST00000533499 PPP1R2P3Q6NXS1 205 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 ALKBH5Q6P6C2 394 aaKnown RBP18.3■□□□□ 0.52
NXF1-216ENST00000533499 XYLT1Q86Y38 959 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 TMTC1Q8IUR5 882 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 ARL14EPQ8N8R7 260 aaPredicted RBP18.3■□□□□ 0.52
NXF1-216ENST00000533499 TDRD5Q8NAT2 981 aaKnown RBP18.3■□□□□ 0.52
NXF1-216ENST00000533499 OLIG1Q8TAK6 271 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 IRGQQ8WZA9 623 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 ZNF653Q96CK0 615 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 PIWIL1Q96J94 861 aaKnown RBP18.3■□□□□ 0.52
NXF1-216ENST00000533499 ZSWIM3Q96MP5 696 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 CYP2S1Q96SQ9 504 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 SLC46A2Q9BY10 475 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 SMG9Q9H0W8 520 aaKnown RBP18.3■□□□□ 0.52
NXF1-216ENST00000533499 TASP1Q9H6P5 420 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 OSER1Q9NX31 292 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.3■□□□□ 0.52
NXF1-216ENST00000533499 MYO1AQ9UBC5 1043 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 CDH7Q9ULB5 785 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 STRIP2Q9ULQ0 834 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 OBSL1O75147 1896 aa18.3■□□□□ 0.52
NXF1-216ENST00000533499 SOWAHDA6NJG2 315 aa18.29■□□□□ 0.52
NXF1-216ENST00000533499 MDM4O15151 490 aa18.29■□□□□ 0.52
NXF1-216ENST00000533499 ATMINO43313 823 aaPredicted RBP18.29■□□□□ 0.52
NXF1-216ENST00000533499 TLR5O60602 858 aa18.29■□□□□ 0.52
NXF1-216ENST00000533499 GZMAP12544 262 aa18.29■□□□□ 0.52
NXF1-216ENST00000533499 CYLC1P35663 651 aaPredicted RBP18.29■□□□□ 0.52
NXF1-216ENST00000533499 C1QBPQ07021 282 aaKnown RBP18.29■□□□□ 0.52
NXF1-216ENST00000533499 EFEMP1Q12805 493 aa18.29■□□□□ 0.52
NXF1-216ENST00000533499 SLC18A3Q16572 532 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms