RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 TCERG1LQ5VWI1 586 aa24.76■■□□□ 1.55
SMPD1-209ENST00000533196 FOXR2Q6PJQ5 311 aa24.76■■□□□ 1.55
SMPD1-209ENST00000533196 ERMP1Q7Z2K6 904 aa24.76■■□□□ 1.55
SMPD1-209ENST00000533196 RPLP0P6Q8NHW5 317 aa24.76■■□□□ 1.55
SMPD1-209ENST00000533196 EZH1Q92800 747 aaPredicted RBP24.76■■□□□ 1.55
SMPD1-209ENST00000533196 DUSP16Q9BY84 665 aa24.76■■□□□ 1.55
SMPD1-209ENST00000533196 METTL14Q9HCE5 456 aaKnown RBP24.76■■□□□ 1.55
SMPD1-209ENST00000533196 CYLDQ9NQC7 956 aa24.76■■□□□ 1.55
SMPD1-209ENST00000533196 ARMCX3Q9UH62 379 aaPredicted RBP24.76■■□□□ 1.55
SMPD1-209ENST00000533196 PSEN1P49768 467 aa24.75■■□□□ 1.55
SMPD1-209ENST00000533196 PMS1P54277 932 aaKnown RBP24.75■■□□□ 1.55
SMPD1-209ENST00000533196 DCAF17Q5H9S7 520 aaPredicted RBP24.75■■□□□ 1.55
SMPD1-209ENST00000533196 KLHDC10Q6PID8 442 aa24.75■■□□□ 1.55
SMPD1-209ENST00000533196 RHBDF2Q6PJF5 856 aa24.75■■□□□ 1.55
SMPD1-209ENST00000533196 CEP63Q96MT8 703 aa24.75■■□□□ 1.55
SMPD1-209ENST00000533196 CISHQ9NSE2 258 aa24.75■■□□□ 1.55
SMPD1-209ENST00000533196 CIZ1Q9ULV3 898 aaPredicted RBP24.75■■□□□ 1.55
SMPD1-209ENST00000533196 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.74■■□□□ 1.55
SMPD1-209ENST00000533196 ACO1P21399 889 aaKnown RBP24.74■■□□□ 1.55
SMPD1-209ENST00000533196 SDHBP21912 280 aa24.74■■□□□ 1.55
SMPD1-209ENST00000533196 KIF11P52732 1056 aa24.74■■□□□ 1.55
SMPD1-209ENST00000533196 GAD2Q05329 585 aa24.74■■□□□ 1.55
SMPD1-209ENST00000533196 PPP1R26Q5T8A7 1209 aaPredicted RBP24.74■■□□□ 1.55
SMPD1-209ENST00000533196 CEP68Q76N32 757 aa24.74■■□□□ 1.55
SMPD1-209ENST00000533196 ZNF276Q8N554 614 aa24.74■■□□□ 1.55
SMPD1-209ENST00000533196 GAB3Q8WWW8 586 aa24.74■■□□□ 1.55
SMPD1-209ENST00000533196 ERCC4Q92889 916 aaPredicted RBP24.74■■□□□ 1.55
SMPD1-209ENST00000533196 TMEM176AQ96HP8 235 aa24.74■■□□□ 1.55
SMPD1-209ENST00000533196 HEXIM2Q96MH2 286 aaKnown RBP24.74■■□□□ 1.55
SMPD1-209ENST00000533196 PNKPQ96T60 521 aa24.74■■□□□ 1.55
SMPD1-209ENST00000533196 UBXN6Q9BZV1 441 aa24.74■■□□□ 1.55
SMPD1-209ENST00000533196 EML5Q05BV3 1969 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 A0A0A0MRY4 1105 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 TRIM49BA6NDI0 452 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 PRR5-ARHGAP8B1AHC4 643 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 ADH5P11766 374 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 ATP5C1P36542 298 aaKnown RBP24.73■■□□□ 1.55
SMPD1-209ENST00000533196 YWHAEP62258 255 aaKnown RBP24.73■■□□□ 1.55
SMPD1-209ENST00000533196 ARHGAP8P85298 464 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 LMNB2Q03252 620 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 GOLGA8FQ08AF8 430 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 GOLGA8DPQ0D2H9 430 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 CBWD6Q4V339 395 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 ZNF394Q53GI3 561 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 CBWD3Q5JTY5 395 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 CBWD5Q5RIA9 395 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 GPRIN1Q7Z2K8 1008 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 CCDC186Q7Z3E2 898 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.73■■□□□ 1.55
SMPD1-209ENST00000533196 TADA2BQ86TJ2 420 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 SLC4A11Q8NBS3 891 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 USP33Q8TEY7 942 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 SLC35C1Q96A29 364 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 EBF1Q9UH73 591 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 MAN1B1Q9UKM7 699 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 USP3Q9Y6I4 520 aa24.73■■□□□ 1.55
SMPD1-209ENST00000533196 MYO18AQ92614 2054 aaKnown RBP24.73■■□□□ 1.55
SMPD1-209ENST00000533196 SDK1Q7Z5N4 2213 aa24.72■■□□□ 1.55
SMPD1-209ENST00000533196 K7EQS6 105 aa24.72■■□□□ 1.55
SMPD1-209ENST00000533196 PMM2O15305 246 aa24.72■■□□□ 1.55
SMPD1-209ENST00000533196 TGM1P22735 817 aa24.72■■□□□ 1.55
SMPD1-209ENST00000533196 RAD23BP54727 409 aa24.72■■□□□ 1.55
SMPD1-209ENST00000533196 MRPS21P82921 87 aaKnown RBP24.72■■□□□ 1.55
SMPD1-209ENST00000533196 DMC1Q14565 340 aa24.72■■□□□ 1.55
SMPD1-209ENST00000533196 PUM1Q14671 1186 aaKnown RBP eCLIP24.72■■□□□ 1.55
SMPD1-209ENST00000533196 HSF5Q4G112 596 aaPredicted RBP24.72■■□□□ 1.55
SMPD1-209ENST00000533196 PREPLQ4J6C6 727 aaPredicted RBP24.72■■□□□ 1.55
SMPD1-209ENST00000533196 ARHGAP17Q68EM7 881 aa24.72■■□□□ 1.55
SMPD1-209ENST00000533196 HTR3DQ70Z44 454 aa24.72■■□□□ 1.55
SMPD1-209ENST00000533196 TATDN2Q93075 761 aa24.72■■□□□ 1.55
SMPD1-209ENST00000533196 RMDN1Q96DB5 314 aa24.72■■□□□ 1.55
SMPD1-209ENST00000533196 FRYLO94915 3013 aa24.71■■□□□ 1.55
SMPD1-209ENST00000533196 CYP26A1O43174 497 aa24.71■■□□□ 1.55
SMPD1-209ENST00000533196 FOXD2O60548 495 aaPredicted RBP24.71■■□□□ 1.55
SMPD1-209ENST00000533196 RPP40O75818 363 aaKnown RBP24.71■■□□□ 1.55
SMPD1-209ENST00000533196 APBB3O95704 486 aa24.71■■□□□ 1.55
SMPD1-209ENST00000533196 APODP05090 189 aa24.71■■□□□ 1.55
SMPD1-209ENST00000533196 SLC8A3P57103 927 aa24.71■■□□□ 1.55
SMPD1-209ENST00000533196 SRSF5Q13243 272 aaKnown RBP24.71■■□□□ 1.55
SMPD1-209ENST00000533196 LPAL2Q16609 132 aa24.71■■□□□ 1.55
SMPD1-209ENST00000533196 LY6G5CQ5SRR4 150 aa24.71■■□□□ 1.55
SMPD1-209ENST00000533196 JAKMIP2Q96AA8 810 aa24.71■■□□□ 1.55
SMPD1-209ENST00000533196 LOXL4Q96JB6 756 aa24.71■■□□□ 1.55
SMPD1-209ENST00000533196 CDK5RAP1Q96SZ6 601 aaKnown RBP24.71■■□□□ 1.55
SMPD1-209ENST00000533196 KLF16Q9BXK1 252 aaPredicted RBP24.71■■□□□ 1.55
SMPD1-209ENST00000533196 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.71■■□□□ 1.55
SMPD1-209ENST00000533196 DLL3Q9NYJ7 618 aa24.71■■□□□ 1.55
SMPD1-209ENST00000533196 CLIC5Q9NZA1 410 aa24.71■■□□□ 1.55
SMPD1-209ENST00000533196 LSM7Q9UK45 103 aaKnown RBP24.71■■□□□ 1.55
SMPD1-209ENST00000533196 USP18Q9UMW8 372 aa24.71■■□□□ 1.55
SMPD1-209ENST00000533196 CACNA1AO00555 2505 aa24.71■■□□□ 1.55
SMPD1-209ENST00000533196 BICDL2A1A5D9 508 aa24.7■■□□□ 1.54
SMPD1-209ENST00000533196 AXIN1O15169 862 aa24.7■■□□□ 1.54
SMPD1-209ENST00000533196 HOXC11O43248 304 aaPredicted RBP24.7■■□□□ 1.54
SMPD1-209ENST00000533196 TBXAS1P24557 533 aaPredicted RBP24.7■■□□□ 1.54
SMPD1-209ENST00000533196 GRIA2P42262 883 aa24.7■■□□□ 1.54
SMPD1-209ENST00000533196 PGFP49763 221 aa24.7■■□□□ 1.54
SMPD1-209ENST00000533196 CUL2Q13617 745 aa24.7■■□□□ 1.54
SMPD1-209ENST00000533196 BTBD8Q5XKL5 378 aa24.7■■□□□ 1.54
SMPD1-209ENST00000533196 CACNA2D4Q7Z3S7 1137 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms