RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 TRAF3IP3Q9Y228 551 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 CITO14578 2027 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 UBE4BO95155 1302 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 URB1O60287 2271 aaKnown RBP12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 TRAV19A0A0A6YYK7 116 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 CYSRT1A8MQ03 144 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 J3QKU1 62 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 CAPN9O14815 690 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 CLIC2O15247 247 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 CALUO43852 315 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 TOM1L1O75674 476 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 KLF8O95600 359 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 SERPINC1P01008 464 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 CSH1P0DML2 217 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 CSH2P0DML3 217 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 HNRNPLP14866 589 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 OPRD1P41143 372 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 ZNF75DP51815 510 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 LILRA4P59901 499 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 FKBP3Q00688 224 aaKnown RBP12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 NOLC1Q14978 699 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 ZBTB6Q15916 424 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 EDRF1Q3B7T1 1238 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 FILIP1Q7Z7B0 1213 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 SLCO6A1Q86UG4 719 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 METTL23Q86XA0 190 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 CREBRFQ8IUR6 639 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 THEM5Q8N1Q8 247 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 GALNT15Q8N3T1 639 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 IL17RCQ8NAC3 791 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 EEF2KMTQ96G04 330 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 CRELD1Q96HD1 420 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 SENP8Q96LD8 212 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 TSPAN18Q96SJ8 248 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 ZDHHC5Q9C0B5 715 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 FAM124BQ9H5Z6 455 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 ARHGAP28Q9P2N2 729 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 SUSD2Q9UGT4 822 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 MAGED2Q9UNF1 606 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 PTPRDP23468 1912 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 PCDH15Q96QU1 1955 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 LAMA5O15230 3695 aa12.05□□□□□ -0.48
TRAPPC4-213ENST00000533149 MAST4O15021 2626 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 ADAMTS9Q9P2N4 1935 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 TCRBV21S2A2A0A5A6 115 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 TTC26A0AVF1 554 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 TRABD2BA6NFA1 517 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 KCNJ18B7U540 433 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 SGK1O00141 431 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 CETN3O15182 167 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 CBFA2T3O75081 653 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 CYP11A1P05108 521 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 CKMP06732 381 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 CLTAP09496 248 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 CXCL8P10145 99 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 GNSP15586 552 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 SCP2P22307 547 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 PPP2R3AQ06190 1150 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 SPAG1Q07617 926 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 STRN3Q13033 797 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 USP4Q13107 963 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 ADAM9Q13443 819 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 KCNJ12Q14500 433 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 PLEKHG6Q3KR16 790 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 SEZ6Q53EL9 994 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 TCP11X2Q5H9J9 407 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 HS2ST1Q7LGA3 356 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 TAS1R3Q7RTX0 852 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 ZC3H3Q8IXZ2 948 aaKnown RBP12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 ZNF843Q8N446 348 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 DEFB119Q8N690 84 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 GOLGA5Q8TBA6 731 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 KCNN1Q92952 543 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 CEP63Q96MT8 703 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 TRPC7Q9HCX4 862 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 ABI2Q9NYB9 513 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 IFNKQ9P0W0 207 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 MAGEC2Q9UBF1 373 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 LIMA1Q9UHB6 759 aaKnown RBP12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 PCOLCE2Q9UKZ9 415 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 EXOC7Q9UPT5 735 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 APC2O95996 2303 aa12.04□□□□□ -0.48
TRAPPC4-213ENST00000533149 ZNF638Q14966 1978 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 ASXL3Q9C0F0 2248 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 LRRC10BA6NIK2 292 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 CLDN3O15551 220 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 NR3C1P04150 777 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 TCF3P15923 654 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 RPL13P26373 211 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 ABCD1P33897 745 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 TIE1P35590 1138 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 UBASH3AP57075 661 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 SNRPFP62306 86 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 NFIL3Q16649 462 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 KYAT1Q16773 422 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 APTXQ7Z2E3 356 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 FAM114A1Q8IWE2 563 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 DCP1BQ8IZD4 617 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 PIP4P2Q8N4L2 257 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 PDCD7Q8N8D1 485 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms