RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 CDK16Q00536 496 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 PRKD1Q15139 912 aaPredicted RBP18.73■□□□□ 0.59
UBXN1-213ENST00000532904 BBS9Q3SYG4 887 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 SEZ6Q53EL9 994 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 LRRC6Q86X45 466 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 TFAP2BQ92481 460 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 CYTH2Q99418 400 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 ZWILCHQ9H900 591 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 IFT122Q9HBG6 1241 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 IQANK1A0A1B0GTG1 560 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 CFAP69A5D8W1 941 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 SIGLEC16A6NMB1 481 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 LRCH4O75427 683 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 RFC1P35251 1148 aaPredicted RBP18.73■□□□□ 0.59
UBXN1-213ENST00000532904 MYL6P60660 151 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 SLC18A2Q05940 514 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 KRT72Q14CN4 511 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 HADHQ16836 314 aaKnown RBP18.73■□□□□ 0.59
UBXN1-213ENST00000532904 DSTYKQ6XUX3 929 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 UNC45BQ8IWX7 931 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 APOPT1Q96IL0 206 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 ZNF333Q96JL9 665 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 TMEM120AQ9BXJ8 343 aa18.73■□□□□ 0.59
UBXN1-213ENST00000532904 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.72■□□□□ 0.59
UBXN1-213ENST00000532904 H3BRB1 525 aa18.72■□□□□ 0.59
UBXN1-213ENST00000532904 IL18RAPO95256 599 aa18.72■□□□□ 0.59
UBXN1-213ENST00000532904 SMPD1P17405 629 aa18.72■□□□□ 0.59
UBXN1-213ENST00000532904 SMTNL2Q2TAL5 461 aa18.72■□□□□ 0.59
UBXN1-213ENST00000532904 ZNF394Q53GI3 561 aa18.72■□□□□ 0.59
UBXN1-213ENST00000532904 SH2D5Q6ZV89 423 aa18.72■□□□□ 0.59
UBXN1-213ENST00000532904 FNIP1Q8TF40 1166 aa18.72■□□□□ 0.59
UBXN1-213ENST00000532904 TUT1Q9H6E5 874 aaKnown RBP18.72■□□□□ 0.59
UBXN1-213ENST00000532904 ALG13Q9NP73 1137 aaKnown RBP18.72■□□□□ 0.59
UBXN1-213ENST00000532904 NVLO15381 856 aaKnown RBP18.72■□□□□ 0.59
UBXN1-213ENST00000532904 GJB1P08034 283 aa18.72■□□□□ 0.59
UBXN1-213ENST00000532904 DLDP09622 509 aaKnown RBP18.72■□□□□ 0.59
UBXN1-213ENST00000532904 HOXC6P09630 235 aa18.72■□□□□ 0.59
UBXN1-213ENST00000532904 VHLP40337 213 aa18.72■□□□□ 0.59
UBXN1-213ENST00000532904 TNFAIP2Q03169 654 aa18.72■□□□□ 0.59
UBXN1-213ENST00000532904 PTK7Q13308 1070 aa18.72■□□□□ 0.59
UBXN1-213ENST00000532904 SGSM1Q2NKQ1 1148 aa18.72■□□□□ 0.59
UBXN1-213ENST00000532904 FAM91A1Q658Y4 838 aa18.72■□□□□ 0.59
UBXN1-213ENST00000532904 NAIF1Q69YI7 327 aaPredicted RBP18.72■□□□□ 0.59
UBXN1-213ENST00000532904 MTHFD1LQ6UB35 978 aa18.72■□□□□ 0.59
UBXN1-213ENST00000532904 APLFQ8IW19 511 aaPredicted RBP18.72■□□□□ 0.59
UBXN1-213ENST00000532904 JOSD2Q8TAC2 188 aa18.72■□□□□ 0.59
UBXN1-213ENST00000532904 SLC44A1Q8WWI5 657 aa18.72■□□□□ 0.59
UBXN1-213ENST00000532904 SERAC1Q96JX3 654 aa18.72■□□□□ 0.59
UBXN1-213ENST00000532904 MINDY3Q9H8M7 445 aa18.72■□□□□ 0.59
UBXN1-213ENST00000532904 MGAMO43451 1857 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 DPPA5A6NC42 116 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 GYG2O15488 501 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 MMP3P08254 477 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 KRT3P12035 628 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 SERPINB3P29508 390 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 POLR2BP30876 1174 aaKnown RBP18.71■□□□□ 0.59
UBXN1-213ENST00000532904 IGBP1P78318 339 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 LBRQ14739 615 aaKnown RBP18.71■□□□□ 0.59
UBXN1-213ENST00000532904 DGKDQ16760 1214 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 KYAT1Q16773 422 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 MUM1Q2TAK8 710 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 PTPN20Q4JDL3 420 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 KCNT1Q5JUK3 1230 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 CST9Q5W186 159 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 DENND1BQ6P3S1 775 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 APBB1IPQ7Z5R6 666 aaPredicted RBP18.71■□□□□ 0.59
UBXN1-213ENST00000532904 IGDCC3Q8IVU1 814 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.71■□□□□ 0.59
UBXN1-213ENST00000532904 MTMR12Q9C0I1 747 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 CDT1Q9H211 546 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 MMADHCQ9H3L0 296 aaPredicted RBP18.71■□□□□ 0.59
UBXN1-213ENST00000532904 NMRK1Q9NWW6 199 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 CNTN3Q9P232 1028 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 CHMP2BQ9UQN3 213 aa18.71■□□□□ 0.59
UBXN1-213ENST00000532904 EIF4E1BA6NMX2 242 aaKnown RBP18.7■□□□□ 0.58
UBXN1-213ENST00000532904 APOC4-APOC2K7ER74 178 aa18.7■□□□□ 0.58
UBXN1-213ENST00000532904 B4GALT5O43286 388 aa18.7■□□□□ 0.58
UBXN1-213ENST00000532904 APOC2P02655 101 aa18.7■□□□□ 0.58
UBXN1-213ENST00000532904 ZNF286BP0CG31 522 aa18.7■□□□□ 0.58
UBXN1-213ENST00000532904 MCF2P10911 925 aa18.7■□□□□ 0.58
UBXN1-213ENST00000532904 EIF3EP60228 445 aaKnown RBP18.7■□□□□ 0.58
UBXN1-213ENST00000532904 DPYSL3Q14195 570 aa18.7■□□□□ 0.58
UBXN1-213ENST00000532904 AMHR2Q16671 573 aa18.7■□□□□ 0.58
UBXN1-213ENST00000532904 MORN1Q5T089 497 aa18.7■□□□□ 0.58
UBXN1-213ENST00000532904 EEF1DP3Q658K8 133 aa18.7■□□□□ 0.58
UBXN1-213ENST00000532904 RINLQ6ZS11 566 aa18.7■□□□□ 0.58
UBXN1-213ENST00000532904 KIAA0319LQ8IZA0 1049 aa18.7■□□□□ 0.58
UBXN1-213ENST00000532904 TAB3Q8N5C8 712 aaPredicted RBP18.7■□□□□ 0.58
UBXN1-213ENST00000532904 FAM71DQ8N9W8 422 aa18.7■□□□□ 0.58
UBXN1-213ENST00000532904 NPLOC4Q8TAT6 608 aa18.7■□□□□ 0.58
UBXN1-213ENST00000532904 FBXO6Q9NRD1 293 aaPredicted RBP18.7■□□□□ 0.58
UBXN1-213ENST00000532904 POLIQ9UNA4 740 aa18.7■□□□□ 0.58
UBXN1-213ENST00000532904 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.7■□□□□ 0.58
UBXN1-213ENST00000532904 KLF11O14901 512 aa18.7■□□□□ 0.58
UBXN1-213ENST00000532904 CD48P09326 243 aa18.7■□□□□ 0.58
UBXN1-213ENST00000532904 ELK3P41970 407 aa18.7■□□□□ 0.58
UBXN1-213ENST00000532904 YWHAEP62258 255 aaKnown RBP18.7■□□□□ 0.58
UBXN1-213ENST00000532904 ZNF200P98182 395 aaPredicted RBP18.7■□□□□ 0.58
UBXN1-213ENST00000532904 ZBTB16Q05516 673 aa18.7■□□□□ 0.58
UBXN1-213ENST00000532904 KLC1Q07866 573 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms