RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 IL31RAQ8NI17 732 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 BTBD7Q9P203 1132 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 STOML1Q9UBI4 398 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 GTF3C4Q9UKN8 822 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 SALL3Q9BXA9 1300 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 PIK3C2AO00443 1686 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 HEATR9A2RTY3 570 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 DCLRE1AQ6PJP8 1040 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 RGS9BPQ6ZS82 235 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 FAM131BQ86XD5 332 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 JAMLQ86YT9 394 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 ZNF507Q8TCN5 953 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 TEKT4Q8WW24 435 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 BRI3BPQ8WY22 251 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 MAF1Q9H063 256 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 RNPEPQ9H4A4 650 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 SRRDQ9UH36 339 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 GOLGA8RI6L899 631 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 RPL9P32969 192 aaKnown RBP11.69□□□□□ -0.54
PTPRK-221ENST00000532331 PEX19P40855 299 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 PDK2Q15119 407 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 TMEM119Q4V9L6 283 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 AGR3Q8TD06 166 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 SLC2A14Q8TDB8 520 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 FAM161BQ96MY7 647 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 ING2Q9H160 280 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 KCNF1Q9H3M0 494 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 C20orf96Q9NUD7 363 aaPredicted RBP11.69□□□□□ -0.54
PTPRK-221ENST00000532331 EVA1BQ9NVM1 165 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 HES2Q9Y543 173 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 CSH1P0DML2 217 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 CSH2P0DML3 217 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 RBP3P10745 1247 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 RENBPP51606 427 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 PTK6Q13882 451 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.69□□□□□ -0.54
PTPRK-221ENST00000532331 RNF103-CHMP3A0A140T963 221 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 ZBTB39O15060 712 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 POLBP06746 335 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 SPRP35270 261 aaPredicted RBP11.69□□□□□ -0.54
PTPRK-221ENST00000532331 AP2B1P63010 937 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 TTLL9Q3SXZ7 439 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 SNX31Q8N9S9 440 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 C9orf72Q96LT7 481 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 AGXT2Q9BYV1 514 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 ETNK1Q9HBU6 452 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 FAM105AQ9NUU6 356 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 EEF1DP29692 281 aaKnown RBP11.69□□□□□ -0.54
PTPRK-221ENST00000532331 NUMBP49757 651 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 HNRNPH2P55795 449 aaKnown RBP11.69□□□□□ -0.54
PTPRK-221ENST00000532331 ABCE1P61221 599 aaKnown RBP11.69□□□□□ -0.54
PTPRK-221ENST00000532331 TMEM259Q4ZIN3 620 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 DDX42Q86XP3 938 aaKnown RBP eCLIP11.69□□□□□ -0.54
PTPRK-221ENST00000532331 ECT2Q9H8V3 914 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 ALG13Q9NP73 1137 aaKnown RBP11.69□□□□□ -0.54
PTPRK-221ENST00000532331 RBM12Q9NTZ6 932 aaKnown RBP11.69□□□□□ -0.54
PTPRK-221ENST00000532331 RNF19AQ9NV58 838 aa11.69□□□□□ -0.54
PTPRK-221ENST00000532331 CCL5P13501 91 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 ATP5C1P36542 298 aaKnown RBP11.68□□□□□ -0.54
PTPRK-221ENST00000532331 MTFR1Q15390 333 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 CNPY3Q9BT09 278 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 ADGRE3Q9BY15 652 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 TMEM51Q9NW97 253 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 STK39Q9UEW8 545 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 FBXO10Q9UK96 956 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 AP4E1Q9UPM8 1137 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 AAR2Q9Y312 384 aaKnown RBP11.68□□□□□ -0.54
PTPRK-221ENST00000532331 PHF20L1A8MW92 1017 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 AKAP3O75969 853 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 VCPP55072 806 aaKnown RBP11.68□□□□□ -0.54
PTPRK-221ENST00000532331 FPGSQ05932 587 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 NAA30Q147X3 362 aaPredicted RBP11.68□□□□□ -0.54
PTPRK-221ENST00000532331 ZDHHC17Q8IUH5 632 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 PHACTR4Q8IZ21 702 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 VIPAS39Q9H9C1 493 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 CERS4Q9HA82 394 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 ATP13A1Q9HD20 1204 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 KIF17Q9P2E2 1029 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 SLC39A10Q9ULF5 831 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 CICQ96RK0 1608 aaPredicted RBP11.68□□□□□ -0.54
PTPRK-221ENST00000532331 HNRNPCL2B2RXH8 293 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 HNRNPCL1O60812 293 aaKnown RBP11.68□□□□□ -0.54
PTPRK-221ENST00000532331 PPP3CCP48454 512 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 PKN2Q16513 984 aaKnown RBP11.68□□□□□ -0.54
PTPRK-221ENST00000532331 SLC45A4Q5BKX6 768 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 AARS2Q5JTZ9 985 aaKnown RBP11.68□□□□□ -0.54
PTPRK-221ENST00000532331 WSCD1Q658N2 575 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 PPP2R2DQ66LE6 453 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 SLC24A5Q71RS6 500 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 LGI2Q8N0V4 545 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 GPR20Q99678 358 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 TSEN34Q9BSV6 310 aaKnown RBP11.68□□□□□ -0.54
PTPRK-221ENST00000532331 CD274Q9NZQ7 290 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 CHMP2BQ9UQN3 213 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 HDCP19113 662 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 GLUD2P49448 558 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 LONRF1Q17RB8 773 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 COBLL1Q53SF7 1204 aa11.68□□□□□ -0.54
PTPRK-221ENST00000532331 PSRC1Q6PGN9 363 aaPredicted RBP11.68□□□□□ -0.54
PTPRK-221ENST00000532331 CCNI2Q6ZMN8 369 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms