RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 AP1ARQ63HQ0 302 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 ADGRD1Q6QNK2 874 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 CNTN4Q8IWV2 1026 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 CDH26Q8IXH8 852 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 LZTR1Q8N653 840 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 DTWD2Q8NBA8 298 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 SUPT20HQ8NEM7 779 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 CCDC110Q8TBZ0 833 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 CPT1CQ8TCG5 803 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 SLC30A3Q99726 388 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 SH3GL2Q99962 352 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 MTMR12Q9C0I1 747 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 LTB4R2Q9NPC1 389 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 ZNF212Q9UDV6 495 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 FBXL7Q9UJT9 491 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 ATP11BQ9Y2G3 1177 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 PCDHA1Q9Y5I3 950 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 NUMBLQ9Y6R0 609 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 BAZ1BQ9UIG0 1483 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 WDR19Q8NEZ3 1342 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 KDM3AQ9Y4C1 1321 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 FAM177BA6PVY3 158 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 H0YCG3 227 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 MAN2B1O00754 1011 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 TGFB1I1O43294 461 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 PSMD10O75832 226 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 PDE8BO95263 885 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 PRG2P13727 222 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 GSPT1P15170 499 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 RFC4P35249 363 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 CASP3P42574 277 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 TXKP42681 527 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 CABP4P57796 275 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 TRA2BP62995 288 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 NPRL3Q12980 569 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 PDK1Q15118 436 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 MED22Q15528 200 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 TRIM71Q2Q1W2 868 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 C15orf59Q2T9L4 293 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 PREPLQ4J6C6 727 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 RAB41Q5JT25 222 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 CYP4A22Q5TCH4 519 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 AADACL4Q5VUY2 407 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 LINC00696Q6ZRV3 163 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 PTCHD4Q6ZW05 846 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 PHYKPLQ8IUZ5 450 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 OR6B3Q8NGW1 331 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 XAGE3Q8WTP9 111 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 CFHR4Q92496 578 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 MRPS27Q92552 414 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 RAB7BQ96AH8 199 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 C3orf49Q96BT1 292 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 PERPQ96FX8 193 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 VRK1Q99986 396 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 PLVAPQ9BX97 442 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 FAM129AQ9BZQ8 928 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 NYXQ9GZU5 481 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 MRPL46Q9H2W6 279 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 EHD1Q9H4M9 534 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 SMURF2Q9HAU4 748 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 QPCTLQ9NXS2 382 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 DONSONQ9NYP3 566 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 FBXO40Q9UH90 709 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 GDF2Q9UK05 429 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 PAXBP1Q9Y5B6 917 aa5.53□□□□□ -1.52
ECHDC1-222ENST00000531967 ZNF335Q9H4Z2 1342 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 GOLGA6L10A0A0M3HER8 536 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 DCDC2BA2VCK2 349 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 TNPO2O14787 897 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 RNF113AO15541 343 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 CST3P01034 146 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 RARGP13631 454 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 CPA1P15085 419 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 VAV1P15498 845 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 SAT1P21673 171 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 PPATQ06203 517 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 SCN1BQ07699 218 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 PTP4A2Q12974 167 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 GAS6Q14393 721 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 KHDC1Q4VXA5 237 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 SLC39A12Q504Y0 691 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 STXBP5Q5T5C0 1151 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 CENPPQ6IPU0 288 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 ATG9AQ7Z3C6 839 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 DNAAF5Q86Y56 855 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 ANKS4BQ8N8V4 417 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 BCL7CQ8WUZ0 217 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 PRCCQ92733 491 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 JAM3Q9BX67 310 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 DPH1Q9BZG8 443 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 CHST8Q9H2A9 424 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 RC3H2Q9HBD1 1191 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 RXFP1Q9HBX9 757 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 CYP4F12Q9HCS2 524 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 ARHGEF3Q9NR81 526 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 SCOCQ9UIL1 159 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 RPH3AQ9Y2J0 694 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 CLCA3PQ9Y6N3 262 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 ARHGEF37A1IGU5 675 aa5.52□□□□□ -1.53
ECHDC1-222ENST00000531967 VEGFDO43915 354 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms