RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 TYRP14679 529 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 POLR2EP19388 210 aaKnown RBP6.06□□□□□ -1.44
CD44-231ENST00000531110 NR4A1P22736 598 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 PRDX5P30044 214 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 MCM7P33993 719 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 ACADVLP49748 655 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 PEX5P50542 639 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 CLNS1AP54105 237 aaKnown RBP6.06□□□□□ -1.44
CD44-231ENST00000531110 NKX6-1P78426 367 aaPredicted RBP6.06□□□□□ -1.44
CD44-231ENST00000531110 BASP1P80723 227 aaKnown RBP6.06□□□□□ -1.44
CD44-231ENST00000531110 MRPS25P82663 173 aaKnown RBP6.06□□□□□ -1.44
CD44-231ENST00000531110 TNIP1Q15025 636 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 CCDC153Q494R4 210 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 FLYWCH1Q4VC44 716 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 CPLX2Q6PUV4 134 aaKnown RBP6.06□□□□□ -1.44
CD44-231ENST00000531110 CRELD2Q6UXH1 353 aaPredicted RBP6.06□□□□□ -1.44
CD44-231ENST00000531110 USP51Q70EK9 711 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 HEATR3Q7Z4Q2 680 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 MAPKAPK5Q8IW41 473 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 ITPRIPQ8IWB1 547 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 TEX9Q8N6V9 391 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 SUN5Q8TC36 379 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 CDKL2Q92772 493 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 MTFMTQ96DP5 389 aaKnown RBP6.06□□□□□ -1.44
CD44-231ENST00000531110 SNF8Q96H20 258 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 BOD1Q96IK1 185 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 EPSTI1Q96J88 318 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 JPH2Q9BR39 696 aaPredicted RBP6.06□□□□□ -1.44
CD44-231ENST00000531110 OSBPL10Q9BXB5 764 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 ZNF341Q9BYN7 854 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 CASS4Q9NQ75 786 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 PAPOLBQ9NRJ5 636 aaKnown RBP6.06□□□□□ -1.44
CD44-231ENST00000531110 LMBRD1Q9NUN5 540 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 TRMT1Q9NXH9 659 aaKnown RBP6.06□□□□□ -1.44
CD44-231ENST00000531110 MIS18AQ9NYP9 233 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 CFAP97Q9P2B7 532 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 CHPF2Q9P2E5 772 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 CFDP1Q9UEE9 299 aaPredicted RBP6.06□□□□□ -1.44
CD44-231ENST00000531110 STXBP5LQ9Y2K9 1186 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.06□□□□□ -1.44
CD44-231ENST00000531110 KIF21BO75037 1637 aa6.06□□□□□ -1.44
CD44-231ENST00000531110 CDHR4A6H8M9 788 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 B4DLN1 442 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 AP1G1O43747 822 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 IDH3BO43837 385 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 CHEK2O96017 543 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 FOSP01100 380 aaPredicted RBP6.05□□□□□ -1.44
CD44-231ENST00000531110 GNAI3P08754 354 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 SBK3P0C264 359 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 S100A1P23297 94 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 SLC6A2P23975 617 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 ZFP36P26651 326 aaKnown RBP6.05□□□□□ -1.44
CD44-231ENST00000531110 GNL1P36915 607 aaPredicted RBP6.05□□□□□ -1.44
CD44-231ENST00000531110 PIK3CGP48736 1102 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 GNAI1P63096 354 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 BLOC1S1P78537 153 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 DGCR2P98153 550 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 ZXDAP98168 799 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 OCA2Q04671 838 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 SLFN5Q08AF3 891 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 ABHD18Q0P651 414 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 SMC1AQ14683 1233 aaKnown RBP6.05□□□□□ -1.44
CD44-231ENST00000531110 BCL2A1Q16548 175 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 CCDC93Q567U6 631 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 CMPK2Q5EBM0 449 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 AKNAD1Q5T1N1 836 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 TSHZ3Q63HK5 1081 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 CAPRIN2Q6IMN6 1127 aaKnown RBP6.05□□□□□ -1.44
CD44-231ENST00000531110 MIS18BP1Q6P0N0 1132 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 MRGPREQ86SM8 312 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 ARHGEF19Q8IW93 802 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 GRAMD1CQ8IYS0 662 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 CARNMT1Q8N4J0 409 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 SYT2Q8N9I0 419 aaPredicted RBP6.05□□□□□ -1.44
CD44-231ENST00000531110 SPC24Q8NBT2 197 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 RASSF8Q8NHQ8 419 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 CCDC110Q8TBZ0 833 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 USP6NLQ92738 828 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 SCAMP4Q969E2 229 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 SPDL1Q96EA4 605 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 SNX27Q96L92 541 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 SIK2Q9H0K1 926 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 PARVGQ9HBI0 331 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 AS3MTQ9HBK9 375 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 GPR35Q9HC97 309 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 C1orf112Q9NSG2 853 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 ATXN10Q9UBB4 475 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 EPS15L1Q9UBC2 864 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 GTF3C4Q9UKN8 822 aa6.05□□□□□ -1.44
CD44-231ENST00000531110 G3BP2Q9UN86 482 aaKnown RBP6.05□□□□□ -1.44
CD44-231ENST00000531110 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.05□□□□□ -1.44
CD44-231ENST00000531110 ABCA10Q8WWZ4 1543 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 GAKO14976 1311 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 ZNF644Q9H582 1327 aaPredicted RBP6.04□□□□□ -1.44
CD44-231ENST00000531110 A0A088AWK7 358 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 IQANK1A0A1B0GTG1 560 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 EME2A4GXA9 379 aaPredicted RBP6.04□□□□□ -1.44
CD44-231ENST00000531110 MYADML2A6NDP7 307 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 M0QX08 132 aa6.04□□□□□ -1.44
CD44-231ENST00000531110 PRC1O43663 620 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms