RNA–Protein interactions for RNA: ENST00000530566.1

POLB-216, Transcript of DNA polymerase beta, humanhuman

TSL 4

Gene POLB, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-216ENST00000530566 TSHZ3Q63HK5 1081 aa8.26□□□□□ -1.09
POLB-216ENST00000530566 SLC36A4Q6YBV0 504 aa8.26□□□□□ -1.09
POLB-216ENST00000530566 ANKS3Q6ZW76 656 aa8.26□□□□□ -1.09
POLB-216ENST00000530566 HACE1Q8IYU2 909 aa8.26□□□□□ -1.09
POLB-216ENST00000530566 ENGASEQ8NFI3 743 aa8.26□□□□□ -1.09
POLB-216ENST00000530566 GPBAR1Q8TDU6 330 aa8.26□□□□□ -1.09
POLB-216ENST00000530566 EBF3Q9H4W6 596 aa8.26□□□□□ -1.09
POLB-216ENST00000530566 PSTPIP2Q9H939 334 aa8.26□□□□□ -1.09
POLB-216ENST00000530566 GPRC5CQ9NQ84 441 aa8.26□□□□□ -1.09
POLB-216ENST00000530566 CEP72Q9P209 647 aa8.26□□□□□ -1.09
POLB-216ENST00000530566 SUCLA2Q9P2R7 463 aaPredicted RBP8.26□□□□□ -1.09
POLB-216ENST00000530566 PCDHA6Q9UN73 950 aa8.26□□□□□ -1.09
POLB-216ENST00000530566 PCDHA8Q9Y5H6 950 aa8.26□□□□□ -1.09
POLB-216ENST00000530566 BACE2Q9Y5Z0 518 aa8.26□□□□□ -1.09
POLB-216ENST00000530566 TDRD15B5MCY1 1934 aaKnown RBP8.26□□□□□ -1.09
POLB-216ENST00000530566 POLQO75417 2590 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 OTOL1A6NHN0 477 aaPredicted RBP8.25□□□□□ -1.09
POLB-216ENST00000530566 SEC24AO95486 1093 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 CER1O95813 267 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 PRKCBP05771 671 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 RNASE1P07998 156 aaKnown RBP8.25□□□□□ -1.09
POLB-216ENST00000530566 ZNF883P0CG24 379 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 MAPK1P28482 360 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 HOXA11P31270 313 aaPredicted RBP8.25□□□□□ -1.09
POLB-216ENST00000530566 PTH1RQ03431 593 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 TWF1Q12792 350 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 TUSC3Q13454 348 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 UBE2SQ16763 222 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 KSR1Q8IVT5 923 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 CCDC33Q8N5R6 958 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 GSTCDQ8NEC7 633 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 STK35Q8TDR2 534 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 SNRNP27Q8WVK2 155 aaKnown RBP8.25□□□□□ -1.09
POLB-216ENST00000530566 FAM168AQ92567 244 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 CD101Q93033 1021 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 UBAC1Q9BSL1 405 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 EIF2AQ9BY44 585 aaKnown RBP8.25□□□□□ -1.09
POLB-216ENST00000530566 TRIM6Q9C030 488 aaPredicted RBP8.25□□□□□ -1.09
POLB-216ENST00000530566 GAREM1Q9H706 876 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 IL21RQ9HBE5 538 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 HPS4Q9NQG7 708 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 MBNL3Q9NUK0 354 aaKnown RBP8.25□□□□□ -1.09
POLB-216ENST00000530566 PPM1HQ9ULR3 514 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 MMP17Q9ULZ9 603 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.25□□□□□ -1.09
POLB-216ENST00000530566 PCDHA10Q9Y5I2 948 aa8.25□□□□□ -1.09
POLB-216ENST00000530566 KLK10O43240 276 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 CILPO75339 1184 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 PRAMEF12O95522 483 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 ITIH2P19823 946 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 AKAP5P24588 427 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 SREBF1P36956 1147 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 SCRN1Q12765 414 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 LRRC14Q15048 493 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 SYCP2LQ5T4T6 812 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 NAIF1Q69YI7 327 aaPredicted RBP8.24□□□□□ -1.09
POLB-216ENST00000530566 SCARA3Q6AZY7 606 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 TRIM68Q6AZZ1 485 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 SLC8B1Q6J4K2 584 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 SMAP1Q8IYB5 467 aaPredicted RBP8.24□□□□□ -1.09
POLB-216ENST00000530566 EXD3Q8N9H8 876 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 TRIML1Q8N9V2 468 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 KCT2Q8NC54 265 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 FBF1Q8TES7 1133 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 USP33Q8TEY7 942 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 HMGB4Q8WW32 186 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 ASB11Q8WXH4 323 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 HSPA12BQ96MM6 686 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 POLR3CQ9BUI4 534 aaPredicted RBP8.24□□□□□ -1.09
POLB-216ENST00000530566 IFT122Q9HBG6 1241 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 STARD5Q9NSY2 213 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 ZSWIM5Q9P217 1185 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 PCDHGB2Q9Y5G2 931 aa8.24□□□□□ -1.09
POLB-216ENST00000530566 CENPEQ02224 2701 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 ANO9A1A5B4 782 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 MEIS1O00470 390 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 FANCGO15287 622 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 SMARCA5O60264 1052 aaPredicted RBP8.23□□□□□ -1.09
POLB-216ENST00000530566 ERLIN2O94905 339 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 GJA4P35212 333 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 MATKP42679 507 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 AFMP43652 599 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 CLDN6P56747 220 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 PRKCEQ02156 737 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 NCBP1Q09161 790 aaKnown RBP8.23□□□□□ -1.09
POLB-216ENST00000530566 ARHGAP15Q53QZ3 475 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 GPR158Q5T848 1215 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 DBX2Q6ZNG2 339 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 USP49Q70CQ1 688 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 KCNE4Q8WWG9 221 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 RRP36Q96EU6 259 aaKnown RBP8.23□□□□□ -1.09
POLB-216ENST00000530566 TNKS2Q9H2K2 1166 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 NXF3Q9H4D5 531 aaKnown RBP8.23□□□□□ -1.09
POLB-216ENST00000530566 PARP2Q9UGN5 583 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 SEC63Q9UGP8 760 aaKnown RBP8.23□□□□□ -1.09
POLB-216ENST00000530566 TBX20Q9UMR3 447 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 BTBD3Q9Y2F9 522 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 HELZP42694 1942 aaKnown RBP8.23□□□□□ -1.09
POLB-216ENST00000530566 OTOGQ6ZRI0 2925 aa8.23□□□□□ -1.09
POLB-216ENST00000530566 ZNF213O14771 459 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms