RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 CYP3A43Q9HB55 503 aa22.11■■□□□ 1.13
SMPD1-204ENST00000530395 TLR8Q9NR97 1041 aaKnown RBP22.11■■□□□ 1.13
SMPD1-204ENST00000530395 MMP17Q9ULZ9 603 aa22.11■■□□□ 1.13
SMPD1-204ENST00000530395 LAMA1P25391 3075 aa22.1■■□□□ 1.13
SMPD1-204ENST00000530395 RHOBTB1O94844 696 aa22.1■■□□□ 1.13
SMPD1-204ENST00000530395 ZNF806P0C7X5 589 aa22.1■■□□□ 1.13
SMPD1-204ENST00000530395 ADORA2BP29275 332 aa22.1■■□□□ 1.13
SMPD1-204ENST00000530395 GAD2Q05329 585 aa22.1■■□□□ 1.13
SMPD1-204ENST00000530395 PLK5Q496M5 336 aa22.1■■□□□ 1.13
SMPD1-204ENST00000530395 BTBD8Q5XKL5 378 aa22.1■■□□□ 1.13
SMPD1-204ENST00000530395 C12orf29Q8N999 325 aa22.1■■□□□ 1.13
SMPD1-204ENST00000530395 ZMIZ2Q8NF64 920 aa22.1■■□□□ 1.13
SMPD1-204ENST00000530395 NT5C1AQ9BXI3 368 aa22.1■■□□□ 1.13
SMPD1-204ENST00000530395 NIF3L1Q9GZT8 377 aa22.1■■□□□ 1.13
SMPD1-204ENST00000530395 MMRN2Q9H8L6 949 aa22.1■■□□□ 1.13
SMPD1-204ENST00000530395 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.1■■□□□ 1.13
SMPD1-204ENST00000530395 ARHGEF4Q9NR80 690 aa22.1■■□□□ 1.13
SMPD1-204ENST00000530395 GDF9O60383 454 aa22.09■■□□□ 1.13
SMPD1-204ENST00000530395 TLR5O60602 858 aa22.09■■□□□ 1.13
SMPD1-204ENST00000530395 BEST1O76090 585 aa22.09■■□□□ 1.13
SMPD1-204ENST00000530395 ALDH1A2O94788 518 aa22.09■■□□□ 1.13
SMPD1-204ENST00000530395 ZNF202O95125 648 aa22.09■■□□□ 1.13
SMPD1-204ENST00000530395 KAT7O95251 611 aa22.09■■□□□ 1.13
SMPD1-204ENST00000530395 MPLP40238 635 aa22.09■■□□□ 1.13
SMPD1-204ENST00000530395 SLC6A11P48066 632 aa22.09■■□□□ 1.13
SMPD1-204ENST00000530395 ADAM9Q13443 819 aa22.09■■□□□ 1.13
SMPD1-204ENST00000530395 CCDC6Q16204 474 aa22.09■■□□□ 1.13
SMPD1-204ENST00000530395 HSF5Q4G112 596 aaPredicted RBP22.09■■□□□ 1.13
SMPD1-204ENST00000530395 PREPLQ4J6C6 727 aaPredicted RBP22.09■■□□□ 1.13
SMPD1-204ENST00000530395 USP39Q53GS9 565 aaKnown RBP22.09■■□□□ 1.13
SMPD1-204ENST00000530395 LY6G5CQ5SRR4 150 aa22.09■■□□□ 1.13
SMPD1-204ENST00000530395 CCDC33Q8N5R6 958 aa22.09■■□□□ 1.13
SMPD1-204ENST00000530395 TAS1R2Q8TE23 839 aa22.09■■□□□ 1.13
SMPD1-204ENST00000530395 HNRNPABQ99729 332 aaKnown RBP22.09■■□□□ 1.13
SMPD1-204ENST00000530395 DUSP9Q99956 384 aaKnown RBP22.09■■□□□ 1.13
SMPD1-204ENST00000530395 GOLPH3LQ9H4A5 285 aa22.09■■□□□ 1.13
SMPD1-204ENST00000530395 IRF1P10914 325 aa22.08■■□□□ 1.13
SMPD1-204ENST00000530395 GBP1P32455 592 aa22.08■■□□□ 1.13
SMPD1-204ENST00000530395 GRIA2P42262 883 aa22.08■■□□□ 1.13
SMPD1-204ENST00000530395 KDSRQ06136 332 aa22.08■■□□□ 1.13
SMPD1-204ENST00000530395 PPP3CAQ08209 521 aa22.08■■□□□ 1.13
SMPD1-204ENST00000530395 GOLGA8FQ08AF8 430 aa22.08■■□□□ 1.13
SMPD1-204ENST00000530395 GOLGA8DPQ0D2H9 430 aa22.08■■□□□ 1.13
SMPD1-204ENST00000530395 SF3A2Q15428 464 aaKnown RBP22.08■■□□□ 1.13
SMPD1-204ENST00000530395 IL31Q6EBC2 164 aa22.08■■□□□ 1.13
SMPD1-204ENST00000530395 ANO7Q6IWH7 933 aa22.08■■□□□ 1.13
SMPD1-204ENST00000530395 CLEC20AQ6ZU45 233 aa22.08■■□□□ 1.13
SMPD1-204ENST00000530395 C12orf40Q86WS4 652 aa22.08■■□□□ 1.13
SMPD1-204ENST00000530395 DDX1Q92499 740 aaKnown RBP22.08■■□□□ 1.13
SMPD1-204ENST00000530395 CYFIP2Q96F07 1278 aa22.08■■□□□ 1.13
SMPD1-204ENST00000530395 CNOT6LQ96LI5 555 aaKnown RBP22.08■■□□□ 1.13
SMPD1-204ENST00000530395 DUSP15Q9H1R2 295 aaPredicted RBP22.08■■□□□ 1.13
SMPD1-204ENST00000530395 TMEM8AQ9HCN3 771 aa22.08■■□□□ 1.13
SMPD1-204ENST00000530395 VPS45Q9NRW7 570 aa22.08■■□□□ 1.13
SMPD1-204ENST00000530395 DCLK1O15075 740 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 CD58P19256 250 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 GTF2H1P32780 548 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 TNFRSF4P43489 277 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 LIMK1P53667 647 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 CRY1Q16526 586 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 EDRF1Q3B7T1 1238 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 PLA2G2CQ5R387 149 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 NUDT18Q6ZVK8 323 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 RASSF3Q86WH2 238 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 BBS7Q8IWZ6 715 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 ALLCQ8N6M5 410 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 JAKMIP2Q96AA8 810 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 TWNKQ96RR1 684 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 TPSD1Q9BZJ3 242 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 APOBEC3GQ9HC16 384 aaKnown RBP22.07■■□□□ 1.12
SMPD1-204ENST00000530395 PNPLA8Q9NP80 782 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 SCML2Q9UQR0 700 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 PCDHA5Q9Y5H7 936 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 NUP205Q92621 2012 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 THADAQ6YHU6 1953 aa22.07■■□□□ 1.12
SMPD1-204ENST00000530395 HOXC11O43248 304 aaPredicted RBP22.06■■□□□ 1.12
SMPD1-204ENST00000530395 CILPO75339 1184 aa22.06■■□□□ 1.12
SMPD1-204ENST00000530395 KLF8O95600 359 aaPredicted RBP22.06■■□□□ 1.12
SMPD1-204ENST00000530395 TIE1P35590 1138 aa22.06■■□□□ 1.12
SMPD1-204ENST00000530395 ANO4Q32M45 955 aa22.06■■□□□ 1.12
SMPD1-204ENST00000530395 ZCWPW2Q504Y3 356 aa22.06■■□□□ 1.12
SMPD1-204ENST00000530395 PPM1JQ5JR12 505 aa22.06■■□□□ 1.12
SMPD1-204ENST00000530395 EOGTQ5NDL2 527 aa22.06■■□□□ 1.12
SMPD1-204ENST00000530395 KRT39Q6A163 491 aa22.06■■□□□ 1.12
SMPD1-204ENST00000530395 TTC30AQ86WT1 665 aa22.06■■□□□ 1.12
SMPD1-204ENST00000530395 TTC39CQ8N584 583 aa22.06■■□□□ 1.12
SMPD1-204ENST00000530395 TXNDC5Q8NBS9 432 aaKnown RBP22.06■■□□□ 1.12
SMPD1-204ENST00000530395 POLMQ9NP87 494 aaPredicted RBP22.06■■□□□ 1.12
SMPD1-204ENST00000530395 CYLDQ9NQC7 956 aa22.06■■□□□ 1.12
SMPD1-204ENST00000530395 SPHK2Q9NRA0 654 aa22.06■■□□□ 1.12
SMPD1-204ENST00000530395 RMND1Q9NWS8 449 aa22.06■■□□□ 1.12
SMPD1-204ENST00000530395 DEC1Q9P2X7 70 aa22.06■■□□□ 1.12
SMPD1-204ENST00000530395 LSM7Q9UK45 103 aaKnown RBP22.06■■□□□ 1.12
SMPD1-204ENST00000530395 CNOT1A5YKK6 2376 aaKnown RBP22.05■■□□□ 1.12
SMPD1-204ENST00000530395 A0A0A0MRY4 1105 aa22.05■■□□□ 1.12
SMPD1-204ENST00000530395 CYP26A1O43174 497 aa22.05■■□□□ 1.12
SMPD1-204ENST00000530395 STX10O60499 249 aa22.05■■□□□ 1.12
SMPD1-204ENST00000530395 EPB41P11171 864 aaKnown RBP22.05■■□□□ 1.12
SMPD1-204ENST00000530395 ACO1P21399 889 aaKnown RBP22.05■■□□□ 1.12
SMPD1-204ENST00000530395 ATP5C1P36542 298 aaKnown RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms