RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 KCNE5Q9UJ90 142 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 AJAP1Q9UKB5 411 aaPredicted RBP4.34□□□□□ -1.71
CTR9-205ENST00000529898 TMCO1Q9UM00 188 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 CARD8Q9Y2G2 431 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 ZNF510Q9Y2H8 683 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.34□□□□□ -1.71
CTR9-205ENST00000529898 PCDHGA2Q9Y5H1 932 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 ANKRD36BQ8N2N9 1353 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 C9orf84Q5VXU9 1444 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 PRAG1Q86YV5 1406 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 A2MP01023 1474 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 PLB1Q6P1J6 1458 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 MAGI2Q86UL8 1455 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 ABCC2Q92887 1545 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 TTC37Q6PGP7 1564 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 KIAA1210Q9ULL0 1709 aa4.34□□□□□ -1.71
CTR9-205ENST00000529898 KDM5AP29375 1690 aaKnown RBP4.33□□□□□ -1.72
CTR9-205ENST00000529898 ANKRD50Q9ULJ7 1429 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 GPRASP1Q5JY77 1395 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 MYBBP1AQ9BQG0 1328 aaKnown RBP4.33□□□□□ -1.72
CTR9-205ENST00000529898 CCDC78A2IDD5 438 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 H0YC42 278 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 EIF3FO00303 357 aaPredicted RBP4.33□□□□□ -1.72
CTR9-205ENST00000529898 ZNF189O75820 626 aaPredicted RBP4.33□□□□□ -1.72
CTR9-205ENST00000529898 CKBP12277 381 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 CD9P21926 228 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 FGFR4P22455 802 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 FDXRP22570 491 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 MATR3P43243 847 aaKnown RBP eCLIP4.33□□□□□ -1.72
CTR9-205ENST00000529898 TPD52P55327 224 aaPredicted RBP4.33□□□□□ -1.72
CTR9-205ENST00000529898 RAP2BP61225 183 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 CXADRP78310 365 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 KLF1Q13351 362 aaPredicted RBP4.33□□□□□ -1.72
CTR9-205ENST00000529898 DRP2Q13474 957 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 STIM1Q13586 685 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 SPDYE7PQ495Y7 208 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 STRIP1Q5VSL9 837 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 THOC7Q6I9Y2 204 aaKnown RBP4.33□□□□□ -1.72
CTR9-205ENST00000529898 ZNF529Q6P280 563 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 CPLX2Q6PUV4 134 aaKnown RBP4.33□□□□□ -1.72
CTR9-205ENST00000529898 CCBE1Q6UXH8 406 aaPredicted RBP4.33□□□□□ -1.72
CTR9-205ENST00000529898 YTHDF3Q7Z739 585 aaKnown RBP4.33□□□□□ -1.72
CTR9-205ENST00000529898 ITPRIPQ8IWB1 547 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 CLASRPQ8N2M8 674 aaKnown RBP4.33□□□□□ -1.72
CTR9-205ENST00000529898 Q8NA96 180 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 TRIM58Q8NG06 486 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 SUN5Q8TC36 379 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 PARD3BQ8TEW8 1205 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 ATRIPQ8WXE1 791 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 USP6NLQ92738 828 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 SMARCE1Q969G3 411 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 CAVIN3Q969G5 261 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 C8orf76Q96K31 380 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 RPS6KC1Q96S38 1066 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 MYOCQ99972 504 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 JPH2Q9BR39 696 aaPredicted RBP4.33□□□□□ -1.72
CTR9-205ENST00000529898 EIF2AQ9BY44 585 aaKnown RBP4.33□□□□□ -1.72
CTR9-205ENST00000529898 ALOXE3Q9BYJ1 711 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 UPF3BQ9BZI7 483 aaKnown RBP4.33□□□□□ -1.72
CTR9-205ENST00000529898 PUS7LQ9H0K6 701 aaKnown RBP4.33□□□□□ -1.72
CTR9-205ENST00000529898 ZHX3Q9H4I2 956 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 MANSC1Q9H8J5 431 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 GALNT9Q9HCQ5 603 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 MKS1Q9NXB0 559 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 RNF181Q9P0P0 153 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 CFDP1Q9UEE9 299 aaPredicted RBP4.33□□□□□ -1.72
CTR9-205ENST00000529898 ADAM21Q9UKJ8 722 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 ZBTB21Q9ULJ3 1066 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 TRAF3IP3Q9Y228 551 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 MRPL11Q9Y3B7 192 aaKnown RBP4.33□□□□□ -1.72
CTR9-205ENST00000529898 ACTL7AQ9Y615 435 aa4.33□□□□□ -1.72
CTR9-205ENST00000529898 PLA2R1Q13018 1463 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 CCDC141Q6ZP82 1450 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 IFT140Q96RY7 1462 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 TMEM94Q12767 1356 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 TTC34A8MYJ7 566 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 WDR46O15213 610 aaKnown RBP4.32□□□□□ -1.72
CTR9-205ENST00000529898 GPR32O75388 356 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 RNF8O76064 485 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 TMCC1O94876 653 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 LUC7L3O95232 432 aaKnown RBP4.32□□□□□ -1.72
CTR9-205ENST00000529898 SLU7O95391 586 aaKnown RBP4.32□□□□□ -1.72
CTR9-205ENST00000529898 TUBBP07437 444 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 LDHCP07864 332 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 RAP2AP10114 183 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 IBSPP21815 317 aaPredicted RBP4.32□□□□□ -1.72
CTR9-205ENST00000529898 SLC6A2P23975 617 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 CSTF2P33240 577 aaKnown RBP eCLIP4.32□□□□□ -1.72
CTR9-205ENST00000529898 ARHGAP25P42331 645 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 NLRP5P59047 1200 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 PPIDQ08752 370 aaKnown RBP4.32□□□□□ -1.72
CTR9-205ENST00000529898 COG2Q14746 738 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 CYP2A13Q16696 494 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 ALDH1L2Q3SY69 923 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 CEP85LQ5SZL2 805 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 ADALQ6DHV7 355 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 CAPRIN2Q6IMN6 1127 aaKnown RBP4.32□□□□□ -1.72
CTR9-205ENST00000529898 TLDC1Q6P9B6 456 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 FBXO38Q6PIJ6 1188 aa4.32□□□□□ -1.72
CTR9-205ENST00000529898 SESTD1Q86VW0 696 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms