RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 C1SP09871 688 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 MBL2P11226 248 aaPredicted RBP12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 BDNFP23560 247 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 POLR2BP30876 1174 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 HNF1BP35680 557 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 AFF3P51826 1226 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 ZNF131P52739 623 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 FOSBP53539 338 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 RTP5Q14D33 572 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 POSTNQ15063 836 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 IL17AQ16552 155 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 SOWAHAQ2M3V2 549 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 DCAF12L1Q5VU92 463 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 GRAMD4Q6IC98 578 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 PCSK4Q6UW60 755 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 CRELD2Q6UXH1 353 aaPredicted RBP12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 LIMS2Q7Z4I7 341 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 OSTM1Q86WC4 334 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 TMEM25Q86YD3 366 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 ADGRF2Q8IZF7 708 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 SNIP1Q8TAD8 396 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 SCFD1Q8WVM8 642 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 OVCA2Q8WZ82 227 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 SLITRK1Q96PX8 696 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 XPO6Q96QU8 1125 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 ACOX2Q99424 681 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 GPR174Q9BXC1 333 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 PARVGQ9HBI0 331 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 WDR35Q9P2L0 1181 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 ITGA11Q9UKX5 1188 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 SHROOM3Q8TF72 1996 aa12.39□□□□□ -0.43
AMBRA1-207ENST00000529553 NPHP3-ACAD11A0A0J9YXS1 232 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 K7ENM7 598 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 NPC1O15118 1278 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 PAPSS1O43252 624 aaPredicted RBP12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 TLX3O43711 291 aaPredicted RBP12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 DFNA5O60443 496 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 ABL1P00519 1130 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 IGLV3-19P01714 112 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 ITGB3P05106 788 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 JUPP14923 745 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 IRX6P78412 446 aaPredicted RBP12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 RBP5P82980 135 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 GUCY1B3Q02153 619 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 TAF10Q12962 218 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 ANO4Q32M45 955 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 SNX30Q5VWJ9 437 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 DHRS13Q6UX07 377 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 KIAA1324Q6UXG2 1013 aaKnown RBP12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 LURAP1LQ8IV03 231 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 CSGALNACT2Q8N6G5 542 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 C1orf127Q8N9H9 656 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 PDZD8Q8NEN9 1154 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 CXorf38Q8TB03 319 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 C8orf76Q96K31 380 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 NUP58Q9BVL2 599 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 ST6GALNAC4Q9H4F1 302 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 BTBD3Q9Y2F9 522 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 SH3BP1Q9Y3L3 701 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 SNX9Q9Y5X1 595 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 MYO18BQ8IUG5 2567 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 SCN1AP35498 2009 aa12.38□□□□□ -0.43
AMBRA1-207ENST00000529553 A0A1B0GVT2 93 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 SCAMP3O14828 347 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 SLC26A4O43511 780 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 CACNG3O60359 315 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 ATP2C2O75185 946 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 FAM163BP0C2L3 166 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 ANAPC15P60006 121 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 TFAMQ00059 246 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 RHDQ02161 417 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 SEMG2Q02383 582 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 GNL2Q13823 731 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 E2F5Q15329 346 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 SF3A1Q15459 793 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 TEAD4Q15561 434 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 ZRSR1Q15695 479 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 INAVAQ3KP66 663 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 CACTIN-AS1Q8N1I8 211 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 FBXO18Q8NFZ0 1043 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 MYCBPAPQ8TBZ2 947 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 FGF11Q92914 225 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 IGSF8Q969P0 613 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 ZFRQ96KR1 1074 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 SYT15Q9BQS2 421 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 REEP2Q9BRK0 252 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 SLC6A17Q9H1V8 727 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 CD93Q9NPY3 652 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 DNAJC17Q9NVM6 304 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 AK5Q9Y6K8 562 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 HELZP42694 1942 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 CEP192Q8TEP8 1941 aa12.37□□□□□ -0.43
AMBRA1-207ENST00000529553 HECTD1Q9ULT8 2610 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 SPTA1P02549 2419 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 B8ZZF3 427 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 PRRT4C9JH25 899 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 TRIM24O15164 1050 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 COCHO43405 550 aa12.36□□□□□ -0.43
AMBRA1-207ENST00000529553 FAM13AO94988 1023 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms