RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 GRIK3Q13003 919 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 XRCC4Q13426 336 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 DPYSL2Q16555 572 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 DEFB115Q30KQ5 88 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 SLC25A52Q3SY17 297 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 ANKRD20A8PQ5CZ79 823 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 SLC9A4Q6AI14 798 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 PPP1R21Q6ZMI0 780 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 AGMOQ6ZNB7 445 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 METTL23Q86XA0 190 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 FUKQ8N0W3 1084 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 ZFP42Q96MM3 310 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 FAM118BQ9BPY3 351 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 PCDH18Q9HCL0 1135 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 DDX43Q9NXZ2 648 aaKnown RBP15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 RRN3Q9NYV6 651 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 NINJ2Q9NZG7 142 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 STAP1Q9ULZ2 295 aa15.41■□□□□ 0.06
ECHDC1-220ENST00000528402 A0A087WUV0 522 aaPredicted RBP15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 TLDC2A0PJX2 215 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 BCLAF3A2AJT9 711 aaKnown RBP15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 PIK3R2O00459 728 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 GRAP2O75791 330 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 IFNB1P01574 187 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 CD48P09326 243 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 CTSHP09668 335 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 ODC1P11926 461 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 HPDP32754 393 aaPredicted RBP15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 ATP1A2P50993 1020 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 HDAC4P56524 1084 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 BCAR1P56945 870 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 YWHAZP63104 245 aaKnown RBP15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 DYNLT1P63172 113 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 MRPS5P82675 430 aaKnown RBP15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 NR1H3Q13133 447 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 AUHQ13825 339 aaKnown RBP15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 UPP1Q16831 310 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 CDO1Q16878 200 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 DNAJC21Q5F1R6 531 aaKnown RBP15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 ZNF618Q5T7W0 954 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 DARS2Q6PI48 645 aaKnown RBP15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 PIGZQ86VD9 579 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 WNT8BQ93098 351 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 MED10Q9BTT4 135 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 SNRNP25Q9BV90 132 aaKnown RBP15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 EPN3Q9H201 632 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 AGO3Q9H9G7 860 aaKnown RBP15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 TMEM51Q9NW97 253 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 RNF186Q9NXI6 227 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 SLC12A6Q9UHW9 1150 aa15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 FARP1Q9Y4F1 1045 aaPredicted RBP15.4■□□□□ 0.06
ECHDC1-220ENST00000528402 GRIN2DO15399 1336 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 E7EVH7 732 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 EOMESO95936 686 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 CYP11A1P05108 521 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 CD52P31358 61 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 LSP1P33241 339 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 MMP13P45452 471 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 CLCNKBP51801 687 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 ARL4CP56559 192 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 TRIM32Q13049 653 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 TAF5Q15542 800 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 MAPRE1Q15691 268 aaKnown RBP15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 KYNUQ16719 465 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 CCDC142Q17RM4 750 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 TRIM71Q2Q1W2 868 aaKnown RBP15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 SH3PXD2AQ5TCZ1 1133 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 SPATS2Q86XZ4 545 aaKnown RBP15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 SIX6OS1Q8N1H7 587 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 PLD5Q8N7P1 536 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 NT5C3BQ969T7 300 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 RTP4Q96DX8 246 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 PIWIL1Q96J94 861 aaKnown RBP15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 GLT1D1Q96MS3 346 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 SLC9A7Q96T83 725 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 SYT15Q9BQS2 421 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 ACBD6Q9BR61 282 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 TRIM62Q9BVG3 475 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 B3GNT5Q9BYG0 378 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 CNGB3Q9NQW8 809 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 RNF19AQ9NV58 838 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 PAK5Q9P286 719 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 ACTL7BQ9Y614 415 aa15.39■□□□□ 0.05
ECHDC1-220ENST00000528402 KIF3CO14782 793 aa15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 CDH16O75309 829 aa15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 ACSL3O95573 720 aa15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 IL4RP24394 825 aa15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 PHBP35232 272 aa15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 RPL22P35268 128 aaKnown RBP15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 ACLYP53396 1101 aa15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 PRMT2P55345 433 aa15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 TUSC3Q13454 348 aa15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 LPIN1Q14693 890 aa15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 RASA2Q15283 850 aa15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 DCLRE1AQ6PJP8 1040 aa15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 PAQR9Q6ZVX9 377 aa15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 CDKL3Q8IVW4 592 aaPredicted RBP15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 SCML4Q8N228 414 aa15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 MYCBPAPQ8TBZ2 947 aa15.38■□□□□ 0.05
ECHDC1-220ENST00000528402 BCAS4Q8TDM0 211 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms