RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 NOGQ13253 232 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 DMP1Q13316 513 aaPredicted RBP4.49□□□□□ -1.69
CD44-226ENST00000527889 CDK5R2Q13319 367 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 ADAM9Q13443 819 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 DRP2Q13474 957 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 LRRC32Q14392 662 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 TARBP2Q15633 366 aaKnown RBP4.49□□□□□ -1.69
CD44-226ENST00000527889 MAN2A1Q16706 1144 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 KIZQ2M2Z5 673 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 DUSP28Q4G0W2 176 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 CCDC92Q53HC0 331 aaPredicted RBP4.49□□□□□ -1.69
CD44-226ENST00000527889 HS1BP3Q53T59 392 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 FAM47CQ5HY64 1035 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 MIIPQ5JXC2 388 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 BROXQ5VW32 411 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 OLFML2BQ68BL8 750 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 SPECC1LQ69YQ0 1117 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 ARMCX5Q6P1M9 558 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 STXBP4Q6ZWJ1 553 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 C16orf59Q7L2K0 433 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 FAM214BQ7L5A3 538 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 HAUS6Q7Z4H7 955 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 ZSCAN30Q86W11 494 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 LRRC8AQ8IWT6 810 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 ZC3H3Q8IXZ2 948 aaKnown RBP4.49□□□□□ -1.69
CD44-226ENST00000527889 SYCP3Q8IZU3 236 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 ARMC10Q8N2F6 343 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 LRRC71Q8N4P6 559 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 TMEM161BQ8NDZ6 487 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 MCPH1Q8NEM0 835 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 TRPV1Q8NER1 839 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 AFAP1L1Q8TED9 768 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 FBLIM1Q8WUP2 373 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 KIFAP3Q92845 792 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 FBXW5Q969U6 566 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 E2F7Q96AV8 911 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 HSPBAP1Q96EW2 488 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 HHIPL1Q96JK4 782 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 ZNF668Q96K58 619 aaPredicted RBP4.49□□□□□ -1.69
CD44-226ENST00000527889 FAM167AQ96KS9 214 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 ACCSQ96QU6 501 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 TIPINQ9BVW5 301 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 STRA6Q9BX79 667 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 SLC12A9Q9BXP2 914 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 SMARCAD1Q9H4L7 1026 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 PCIF1Q9H4Z3 704 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 DHX33Q9H6R0 707 aaKnown RBP4.49□□□□□ -1.69
CD44-226ENST00000527889 IPPKQ9H8X2 491 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 RRAGDQ9NQL2 400 aaPredicted RBP4.49□□□□□ -1.69
CD44-226ENST00000527889 KMT5AQ9NQR1 393 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 PDLIM7Q9NR12 457 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 NRBP2Q9NSY0 501 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 LARSQ9P2J5 1176 aaKnown RBP4.49□□□□□ -1.69
CD44-226ENST00000527889 PPARGC1AQ9UBK2 798 aaKnown RBP4.49□□□□□ -1.69
CD44-226ENST00000527889 SEL1LQ9UBV2 794 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 DDX20Q9UHI6 824 aaKnown RBP4.49□□□□□ -1.69
CD44-226ENST00000527889 GJD2Q9UKL4 321 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 CBLCQ9ULV8 474 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 PATJQ8NI35 1801 aa4.49□□□□□ -1.69
CD44-226ENST00000527889 MTCL1Q9Y4B5 1905 aaKnown RBP4.48□□□□□ -1.69
CD44-226ENST00000527889 KMT2BQ9UMN6 2715 aaPredicted RBP4.48□□□□□ -1.69
CD44-226ENST00000527889 ANO9A1A5B4 782 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 DENND3A2RUS2 1198 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 GOLGA8IPA6NC78 632 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 LRRC10BA6NIK2 292 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 LRRIQ4A6NIV6 560 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 GOLGA8JA6NMD2 632 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 ANKRD63C9JTQ0 380 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 TIMM44O43615 452 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 HBP1O60381 514 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 MAFO75444 373 aaPredicted RBP4.48□□□□□ -1.69
CD44-226ENST00000527889 AKAP3O75969 853 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 GYPCP04921 128 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 EDN1P05305 212 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 TPM2P07951 284 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 GJB1P08034 283 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 MMP3P08254 477 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 HOXC6P09630 235 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 ZNF865P0CJ78 1059 aaPredicted RBP4.48□□□□□ -1.69
CD44-226ENST00000527889 EPB41P11171 864 aaKnown RBP4.48□□□□□ -1.69
CD44-226ENST00000527889 INSRRP14616 1297 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 SFPQP23246 707 aaKnown RBP eCLIP4.48□□□□□ -1.69
CD44-226ENST00000527889 GLRA2P23416 452 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 MSNP26038 577 aaKnown RBP4.48□□□□□ -1.69
CD44-226ENST00000527889 CASP14P31944 242 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 BMP8BP34820 402 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 ARL2P36404 184 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 NOP2P46087 812 aaKnown RBP4.48□□□□□ -1.69
CD44-226ENST00000527889 HTR3AP46098 478 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 FLT3LGP49771 235 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 CLCN3P51790 818 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 GSDMDP57764 484 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 LACTBP83111 547 aaPredicted RBP4.48□□□□□ -1.69
CD44-226ENST00000527889 CCZ1BP86790 482 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 CCZ1P86791 482 aaPredicted RBP4.48□□□□□ -1.69
CD44-226ENST00000527889 GTF2BQ00403 316 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 BEX3Q00994 111 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 TNFAIP2Q03169 654 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 PRKCZQ05513 592 aa4.48□□□□□ -1.69
CD44-226ENST00000527889 ALCAMQ13740 583 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms