RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 SIGLEC16A6NMB1 481 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 TRIM49D1C9J1S8 452 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 MCF2LO15068 1137 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 FAM155BO75949 473 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 TGDSO95455 350 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 RARBP10826 455 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 KDELR1P24390 212 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 MYL6P60660 151 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 DPYSL3Q14195 570 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 EMC2Q15006 297 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 ARID3BQ8IVW6 561 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-208ENST00000527323 EMC1Q8N766 993 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 C12orf42Q96LP6 360 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 FGD4Q96M96 766 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 DDX50Q9BQ39 737 aaKnown RBP13.02□□□□□ -0.33
CAPN1-208ENST00000527323 MECRQ9BV79 373 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 CISHQ9NSE2 258 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 PCDH10Q9P2E7 1040 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 ZNF212Q9UDV6 495 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 ANGPTL2Q9UKU9 493 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 DCAF8L1A6NGE4 600 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 AVILO75366 819 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 ZCCHC18P0CG32 403 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 IL1R2P27930 398 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 TRPC3Q13507 836 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 BBS12Q6ZW61 710 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 VSIG10LQ86VR7 867 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 JOSD2Q8TAC2 188 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 SPATA18Q8TC71 538 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 ACAP3Q96P50 834 aa13.02□□□□□ -0.33
CAPN1-208ENST00000527323 SRPK1Q96SB4 655 aaKnown RBP13.02□□□□□ -0.33
CAPN1-208ENST00000527323 ZNF184Q99676 751 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-208ENST00000527323 RLFQ13129 1914 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 LOXHD1Q8IVV2 1947 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 LSM8O95777 96 aaKnown RBP13.01□□□□□ -0.33
CAPN1-208ENST00000527323 POLR2BP30876 1174 aaKnown RBP13.01□□□□□ -0.33
CAPN1-208ENST00000527323 PTPN7P35236 360 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 RTP1P59025 263 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 PSMC1P62191 440 aaKnown RBP13.01□□□□□ -0.33
CAPN1-208ENST00000527323 ROR2Q01974 943 aaKnown RBP13.01□□□□□ -0.33
CAPN1-208ENST00000527323 IRF5Q13568 498 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 PPP1R15BQ5SWA1 713 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 CWF19L1Q69YN2 538 aaKnown RBP13.01□□□□□ -0.33
CAPN1-208ENST00000527323 OR52E8Q6IFG1 317 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 CHSY1Q86X52 802 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 TMPRSS6Q8IU80 811 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 FAF2Q96CS3 445 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 CLPTM1LQ96KA5 538 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 MMADHCQ9H3L0 296 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-208ENST00000527323 JPH1Q9HDC5 661 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-208ENST00000527323 PDLIM7Q9NR12 457 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 KCNG1Q9UIX4 513 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 STRIP2Q9ULQ0 834 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 ADAMTS5Q9UNA0 930 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 CNTN6Q9UQ52 1028 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 E7ESA3 106 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 CSDE1O75534 798 aaKnown RBP13.01□□□□□ -0.33
CAPN1-208ENST00000527323 STBD1O95210 358 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 ETV4P43268 484 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 NEK3P51956 506 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 ALDH18A1P54886 795 aaKnown RBP13.01□□□□□ -0.33
CAPN1-208ENST00000527323 ACTR2P61160 394 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 SH3D19Q5HYK7 790 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 FAM43BQ6ZT52 329 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-208ENST00000527323 SCUBE1Q8IWY4 988 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 WDTC1Q8N5D0 677 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 TRAPPC12Q8WVT3 735 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 SLC44A1Q8WWI5 657 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 TFAP2BQ92481 460 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 ASB3Q9Y575 518 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 CDH23Q9H251 3354 aa13.01□□□□□ -0.33
CAPN1-208ENST00000527323 C3orf70A6NLC5 250 aaPredicted RBP13□□□□□ -0.33
CAPN1-208ENST00000527323 A8MXQ7 604 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 E5RJQ4 531 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 SPECC1L-ADORA2AF8WAN1 911 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 H7C0C1 242 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 AOC2O75106 756 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 LRCH4O75427 683 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 ATP5OP48047 213 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 KCTD2Q14681 263 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 CCNJLQ8IV13 435 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 MFN1Q8IWA4 741 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 PHC3Q8NDX5 983 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 MMP19Q99542 508 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 MTMR12Q9C0I1 747 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 ZNF395Q9H8N7 513 aaPredicted RBP13□□□□□ -0.33
CAPN1-208ENST00000527323 MAP3K20Q9NYL2 800 aaKnown RBP13□□□□□ -0.33
CAPN1-208ENST00000527323 NXF1Q9UBU9 619 aaKnown RBP13□□□□□ -0.33
CAPN1-208ENST00000527323 TJP2Q9UDY2 1190 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 TCRBV5S1A1TA0A578 114 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 GJB1P08034 283 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 GSTA2P09210 222 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 DHRS4L1P0CG22 281 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 ABCD1P33897 745 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 TFAMQ00059 246 aaKnown RBP13□□□□□ -0.33
CAPN1-208ENST00000527323 CHI3L2Q15782 390 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 XKR3Q5GH77 459 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 RASIP1Q5U651 963 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 C1orf146Q5VVC0 180 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 SPRYD7Q5W111 196 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms