RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 OSER1Q9NX31 292 aa13.27□□□□□ -0.29
SMCO4-202ENST00000525141 SMPD4Q9NXE4 827 aa13.27□□□□□ -0.29
SMCO4-202ENST00000525141 EHD2Q9NZN4 543 aa13.27□□□□□ -0.29
SMCO4-202ENST00000525141 HELZP42694 1942 aaKnown RBP13.27□□□□□ -0.29
SMCO4-202ENST00000525141 PMM2O15305 246 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 GREM1O60565 184 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 RNF40O75150 1001 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 CILPO75339 1184 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 LETM1O95202 739 aaPredicted RBP13.26□□□□□ -0.29
SMCO4-202ENST00000525141 TBX18O95935 607 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 CCDC192P0DO97 292 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 P4HA1P13674 534 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 DRD1P21728 446 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 MYH10P35580 1976 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 PIK3CAP42336 1068 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 IFNAR2P48551 515 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 DHCR24Q15392 516 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 CCDC40Q4G0X9 1142 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 TCERG1LQ5VWI1 586 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 CAVIN1Q6NZI2 390 aaKnown RBP13.26□□□□□ -0.29
SMCO4-202ENST00000525141 CLEC20AQ6ZU45 233 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 WDR5BQ86VZ2 330 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 LONP2Q86WA8 852 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 TRIM59Q8IWR1 403 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 CPA6Q8N4T0 437 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 KIAA1958Q8N8K9 716 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 OVCA2Q8WZ82 227 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 CD101Q93033 1021 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 ATP2A3Q93084 1043 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 FBXO32Q969P5 355 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 CYFIP2Q96F07 1278 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 SMARCD1Q96GM5 515 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 FAXDC2Q96IV6 333 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 SLITRK1Q96PX8 696 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 PHF12Q96QT6 1004 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 NMUR1Q9HB89 426 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 DMAP1Q9NPF5 467 aaPredicted RBP13.26□□□□□ -0.29
SMCO4-202ENST00000525141 KRT82Q9NSB4 513 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 GMIPQ9P107 970 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 CFAP97Q9P2B7 532 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 SMG5Q9UPR3 1016 aaKnown RBP13.26□□□□□ -0.29
SMCO4-202ENST00000525141 COQ4Q9Y3A0 265 aa13.26□□□□□ -0.29
SMCO4-202ENST00000525141 A0A0A0MRY4 1105 aa13.25□□□□□ -0.29
SMCO4-202ENST00000525141 CYP17A1P05093 508 aa13.25□□□□□ -0.29
SMCO4-202ENST00000525141 MBL2P11226 248 aaPredicted RBP13.25□□□□□ -0.29
SMCO4-202ENST00000525141 CD58P19256 250 aa13.25□□□□□ -0.29
SMCO4-202ENST00000525141 ADORA2BP29275 332 aa13.25□□□□□ -0.29
SMCO4-202ENST00000525141 ID4P47928 161 aa13.25□□□□□ -0.29
SMCO4-202ENST00000525141 AMPD2Q01433 879 aa13.25□□□□□ -0.29
SMCO4-202ENST00000525141 TPD52L1Q16890 204 aaPredicted RBP13.25□□□□□ -0.29
SMCO4-202ENST00000525141 CBWD6Q4V339 395 aa13.25□□□□□ -0.29
SMCO4-202ENST00000525141 CBWD3Q5JTY5 395 aa13.25□□□□□ -0.29
SMCO4-202ENST00000525141 CBWD5Q5RIA9 395 aa13.25□□□□□ -0.29
SMCO4-202ENST00000525141 HECTD3Q5T447 861 aa13.25□□□□□ -0.29
SMCO4-202ENST00000525141 PPP1R26Q5T8A7 1209 aaPredicted RBP13.25□□□□□ -0.29
SMCO4-202ENST00000525141 IRF2BP1Q8IU81 584 aa13.25□□□□□ -0.29
SMCO4-202ENST00000525141 FBXL13Q8NEE6 735 aa13.25□□□□□ -0.29
SMCO4-202ENST00000525141 IMPG2Q9BZV3 1241 aa13.25□□□□□ -0.29
SMCO4-202ENST00000525141 THAP9Q9H5L6 903 aa13.25□□□□□ -0.29
SMCO4-202ENST00000525141 RAB20Q9NX57 234 aa13.25□□□□□ -0.29
SMCO4-202ENST00000525141 MYO18AQ92614 2054 aaKnown RBP13.25□□□□□ -0.29
SMCO4-202ENST00000525141 MYO16Q9Y6X6 1858 aa13.25□□□□□ -0.29
SMCO4-202ENST00000525141 EML5Q05BV3 1969 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 P4HA2O15460 535 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 MXI1P50539 228 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 PDE6CP51160 858 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 RAD23BP54727 409 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 NR1H3Q13133 447 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 SIM2Q14190 667 aaPredicted RBP13.24□□□□□ -0.29
SMCO4-202ENST00000525141 PPP2R5DQ14738 602 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 STX1AQ16623 288 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 ZNF394Q53GI3 561 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 DCAF17Q5H9S7 520 aaPredicted RBP13.24□□□□□ -0.29
SMCO4-202ENST00000525141 EMC10Q5UCC4 262 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 SCD5Q86SK9 330 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 C12orf40Q86WS4 652 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 FAM114A1Q8IWE2 563 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 SLC4A11Q8NBS3 891 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 CCDC150Q8NCX0 1101 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 PDZD8Q8NEN9 1154 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 ENOX1Q8TC92 643 aaKnown RBP13.24□□□□□ -0.29
SMCO4-202ENST00000525141 P2RY11Q96G91 374 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 ARID3AQ99856 593 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 NT5C1AQ9BXI3 368 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 KLF16Q9BXK1 252 aaPredicted RBP13.24□□□□□ -0.29
SMCO4-202ENST00000525141 DUSP16Q9BY84 665 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 NIF3L1Q9GZT8 377 aa13.24□□□□□ -0.29
SMCO4-202ENST00000525141 ATP8B3O60423 1300 aa13.23□□□□□ -0.29
SMCO4-202ENST00000525141 E2F8A0AVK6 867 aa13.23□□□□□ -0.29
SMCO4-202ENST00000525141 ATG13O75143 517 aa13.23□□□□□ -0.29
SMCO4-202ENST00000525141 NFATC1O95644 943 aa13.23□□□□□ -0.29
SMCO4-202ENST00000525141 PRKCSHP14314 528 aaPredicted RBP13.23□□□□□ -0.29
SMCO4-202ENST00000525141 HNRNPLP14866 589 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMCO4-202ENST00000525141 CNR2P34972 360 aa13.23□□□□□ -0.29
SMCO4-202ENST00000525141 FMO5P49326 533 aa13.23□□□□□ -0.29
SMCO4-202ENST00000525141 KIF11P52732 1056 aa13.23□□□□□ -0.29
SMCO4-202ENST00000525141 KCNH2Q12809 1159 aa13.23□□□□□ -0.29
SMCO4-202ENST00000525141 FBXO43Q4G163 708 aa13.23□□□□□ -0.29
SMCO4-202ENST00000525141 LY6G5CQ5SRR4 150 aa13.23□□□□□ -0.29
SMCO4-202ENST00000525141 TMEM25Q86YD3 366 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms