RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 SLC25A11Q02978 314 aaKnown RBP12.27□□□□□ -0.45
PTPRK-216ENST00000524481 KLF1Q13351 362 aaPredicted RBP12.27□□□□□ -0.45
PTPRK-216ENST00000524481 ZBTB6Q15916 424 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 ANKRD22Q5VYY1 191 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 PPP1R2P3Q6NXS1 205 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 DEFB128Q7Z7B8 93 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 ABI1Q8IZP0 508 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 CCDC185Q8N715 623 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 ANKRD52Q8NB46 1076 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 SLC35F5Q8WV83 523 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 FAF2Q96CS3 445 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 PCED1BQ96HM7 432 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 AGAP3Q96P47 875 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 SYT15Q9BQS2 421 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 PPP1R12CQ9BZL4 782 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 HOMER3Q9NSC5 361 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 ABI2Q9NYB9 513 aaPredicted RBP12.27□□□□□ -0.45
PTPRK-216ENST00000524481 SCN4AP35499 1836 aa12.27□□□□□ -0.45
PTPRK-216ENST00000524481 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.26□□□□□ -0.45
PTPRK-216ENST00000524481 TCRBV7S3A2A0A539 114 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 FAM200BP0CF97 657 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 RBL1P28749 1068 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 VCPP55072 806 aaKnown RBP12.26□□□□□ -0.45
PTPRK-216ENST00000524481 YWHAGP61981 247 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTPRK-216ENST00000524481 ZKSCAN8Q15776 578 aaPredicted RBP12.26□□□□□ -0.45
PTPRK-216ENST00000524481 PPP1R15BQ5SWA1 713 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 ZNF354CQ86Y25 554 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 LRRC52Q8N7C0 313 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 ART4Q93070 314 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 MCRS1Q96EZ8 462 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 CHMP2BQ9UQN3 213 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 TTC3P53804 2025 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 LOC285556D6RIA3 1793 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 GRIN2DO15399 1336 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 EXOC1LA0A1B0GW35 172 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 NEFHP12036 1026 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 RARGP13631 454 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 GOT1P17174 413 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 AXLP30530 894 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 ACLYP53396 1101 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 CACNA2D1P54289 1103 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 GJA9P57773 515 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 GBE1Q04446 702 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 INCA1Q0VD86 236 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 AP1B1Q10567 949 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 KDELC2Q7Z4H8 507 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 PYROXD1Q8WU10 500 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 DEPDC1BQ8WUY9 529 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 ARHGEF2Q92974 986 aaKnown RBP12.26□□□□□ -0.45
PTPRK-216ENST00000524481 GGT7Q9UJ14 662 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 TPX2Q9ULW0 747 aaKnown RBP12.26□□□□□ -0.45
PTPRK-216ENST00000524481 MYO9BQ13459 2157 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 WDR91A4D1P6 747 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 HMGB1P1B2RPK0 211 aaPredicted RBP12.26□□□□□ -0.45
PTPRK-216ENST00000524481 C2CD2LO14523 706 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 PPFIA2O75334 1257 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 HOXD8P13378 290 aaPredicted RBP12.26□□□□□ -0.45
PTPRK-216ENST00000524481 GRIK1P39086 918 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 ROR1Q01973 937 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 RWDD4Q6NW29 188 aaKnown RBP12.26□□□□□ -0.45
PTPRK-216ENST00000524481 NT5DC4Q86YG4 428 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 RUBCNQ92622 972 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 CFAP36Q96G28 342 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTPRK-216ENST00000524481 DDIT4Q9NX09 232 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTPRK-216ENST00000524481 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTPRK-216ENST00000524481 HCSTQ9UBK5 93 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 KIAA1257Q9ULG3 409 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 AP4E1Q9UPM8 1137 aa12.26□□□□□ -0.45
PTPRK-216ENST00000524481 TCRBV5S1A1TA0A578 114 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 NRP1O14786 923 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 MAN1A1P33908 653 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 RPL22P35268 128 aaKnown RBP12.25□□□□□ -0.45
PTPRK-216ENST00000524481 GATMP50440 423 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 HDAC4P56524 1084 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 LMNB2Q03252 620 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 DEUP1Q05D60 604 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 TCEAL1Q15170 157 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 CYP1B1Q16678 543 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 KIAA0319Q5VV43 1072 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 OLFML1Q6UWY5 402 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 ZNF280BQ86YH2 543 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 C4orf33Q8N1A6 199 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 SCAMP5Q8TAC9 235 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 TRIM56Q9BRZ2 755 aaKnown RBP12.25□□□□□ -0.45
PTPRK-216ENST00000524481 CREBZFQ9NS37 354 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 XPO7Q9UIA9 1087 aaKnown RBP12.25□□□□□ -0.45
PTPRK-216ENST00000524481 YJEFN3A6XGL0 299 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 E7ENQ6 273 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 H0YGN5 161 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 KCNK1O00180 336 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 CDH5P33151 784 aaPredicted RBP12.25□□□□□ -0.45
PTPRK-216ENST00000524481 LSP1P33241 339 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 RDXP35241 583 aaKnown RBP12.25□□□□□ -0.45
PTPRK-216ENST00000524481 PNPLA4P41247 253 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 TM4SF4P48230 202 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 YWHAZP63104 245 aaKnown RBP12.25□□□□□ -0.45
PTPRK-216ENST00000524481 PPP2R2AP63151 447 aa12.25□□□□□ -0.45
PTPRK-216ENST00000524481 GSTCDQ8NEC7 633 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms