RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 RDH13Q8NBN7 331 aa24.14■■□□□ 1.45
PVT1-218ENST00000523328 WBP2Q969T9 261 aa24.14■■□□□ 1.45
PVT1-218ENST00000523328 KCNK16Q96T55 309 aa24.14■■□□□ 1.45
PVT1-218ENST00000523328 SPHK2Q9NRA0 654 aa24.14■■□□□ 1.45
PVT1-218ENST00000523328 IL37Q9NZH6 218 aa24.14■■□□□ 1.45
PVT1-218ENST00000523328 CALCOCO1Q9P1Z2 691 aa24.14■■□□□ 1.45
PVT1-218ENST00000523328 DEC1Q9P2X7 70 aa24.14■■□□□ 1.45
PVT1-218ENST00000523328 CHORDC1Q9UHD1 332 aaPredicted RBP24.14■■□□□ 1.45
PVT1-218ENST00000523328 FASNP49327 2511 aaKnown RBP24.14■■□□□ 1.45
PVT1-218ENST00000523328 A8MXQ7 604 aa24.13■■□□□ 1.45
PVT1-218ENST00000523328 TRIM24O15164 1050 aa24.13■■□□□ 1.45
PVT1-218ENST00000523328 TGFB1I1O43294 461 aa24.13■■□□□ 1.45
PVT1-218ENST00000523328 STAU1O95793 577 aaKnown RBP24.13■■□□□ 1.45
PVT1-218ENST00000523328 ATXN3P54252 364 aaPredicted RBP24.13■■□□□ 1.45
PVT1-218ENST00000523328 FAM193AP78312 1265 aa24.13■■□□□ 1.45
PVT1-218ENST00000523328 GFPT1Q06210 699 aaPredicted RBP24.13■■□□□ 1.45
PVT1-218ENST00000523328 ZNF33AQ06730 810 aa24.13■■□□□ 1.45
PVT1-218ENST00000523328 PSMD6Q15008 389 aa24.13■■□□□ 1.45
PVT1-218ENST00000523328 HECTD3Q5T447 861 aa24.13■■□□□ 1.45
PVT1-218ENST00000523328 BTBD8Q5XKL5 378 aa24.13■■□□□ 1.45
PVT1-218ENST00000523328 SLC36A4Q6YBV0 504 aa24.13■■□□□ 1.45
PVT1-218ENST00000523328 EPM2AIP1Q7L775 607 aaPredicted RBP24.13■■□□□ 1.45
PVT1-218ENST00000523328 TMEM25Q86YD3 366 aa24.13■■□□□ 1.45
PVT1-218ENST00000523328 HDDC3Q8N4P3 179 aa24.13■■□□□ 1.45
PVT1-218ENST00000523328 SCAMP5Q8TAC9 235 aa24.13■■□□□ 1.45
PVT1-218ENST00000523328 ZNF516Q92618 1163 aa24.13■■□□□ 1.45
PVT1-218ENST00000523328 GTPBP2Q9BX10 602 aaKnown RBP24.13■■□□□ 1.45
PVT1-218ENST00000523328 GZF1Q9H116 711 aaPredicted RBP24.13■■□□□ 1.45
PVT1-218ENST00000523328 XYLT2Q9H1B5 865 aa24.13■■□□□ 1.45
PVT1-218ENST00000523328 CCSER2Q9H7U1 834 aa24.13■■□□□ 1.45
PVT1-218ENST00000523328 CD248Q9HCU0 757 aa24.13■■□□□ 1.45
PVT1-218ENST00000523328 SH3BP1Q9Y3L3 701 aa24.13■■□□□ 1.45
PVT1-218ENST00000523328 MYH10P35580 1976 aa24.12■■□□□ 1.45
PVT1-218ENST00000523328 A0A1W2PQF6 199 aa24.12■■□□□ 1.45
PVT1-218ENST00000523328 EIF3DO15371 548 aaKnown RBP eCLIP24.12■■□□□ 1.45
PVT1-218ENST00000523328 ZDHHC11BP0C7U3 371 aa24.12■■□□□ 1.45
PVT1-218ENST00000523328 HOXB2P14652 356 aa24.12■■□□□ 1.45
PVT1-218ENST00000523328 TUBP50607 506 aa24.12■■□□□ 1.45
PVT1-218ENST00000523328 RING1Q06587 406 aa24.12■■□□□ 1.45
PVT1-218ENST00000523328 CYP24A1Q07973 514 aa24.12■■□□□ 1.45
PVT1-218ENST00000523328 CUL4AQ13619 759 aa24.12■■□□□ 1.45
PVT1-218ENST00000523328 SLC39A14Q15043 492 aa24.12■■□□□ 1.45
PVT1-218ENST00000523328 PREPLQ4J6C6 727 aaPredicted RBP24.12■■□□□ 1.45
PVT1-218ENST00000523328 C10orf76Q5T2E6 689 aa24.12■■□□□ 1.45
PVT1-218ENST00000523328 PAQR9Q6ZVX9 377 aa24.12■■□□□ 1.45
PVT1-218ENST00000523328 ZNF507Q8TCN5 953 aa24.12■■□□□ 1.45
PVT1-218ENST00000523328 CCDC127Q96BQ5 260 aa24.12■■□□□ 1.45
PVT1-218ENST00000523328 AGPAT3Q9NRZ7 376 aa24.12■■□□□ 1.45
PVT1-218ENST00000523328 STARD13Q9Y3M8 1113 aa24.12■■□□□ 1.45
PVT1-218ENST00000523328 FREM2Q5SZK8 3169 aa24.12■■□□□ 1.45
PVT1-218ENST00000523328 IGHV1OR15-9A0A0B4J2B8 117 aa24.11■■□□□ 1.45
PVT1-218ENST00000523328 FAM92AA1XBS5 289 aa24.11■■□□□ 1.45
PVT1-218ENST00000523328 FAM221BA6H8Z2 402 aa24.11■■□□□ 1.45
PVT1-218ENST00000523328 OPHN1O60890 802 aa24.11■■□□□ 1.45
PVT1-218ENST00000523328 PDCP20941 246 aa24.11■■□□□ 1.45
PVT1-218ENST00000523328 NTSR1P30989 418 aa24.11■■□□□ 1.45
PVT1-218ENST00000523328 SLC5A3P53794 718 aa24.11■■□□□ 1.45
PVT1-218ENST00000523328 MYL6P60660 151 aa24.11■■□□□ 1.45
PVT1-218ENST00000523328 ANO4Q32M45 955 aa24.11■■□□□ 1.45
PVT1-218ENST00000523328 LRSAM1Q6UWE0 723 aa24.11■■□□□ 1.45
PVT1-218ENST00000523328 FAM35AQ86V20 835 aa24.11■■□□□ 1.45
PVT1-218ENST00000523328 SLC41A1Q8IVJ1 513 aa24.11■■□□□ 1.45
PVT1-218ENST00000523328 MINDY1Q8N5J2 469 aa24.11■■□□□ 1.45
PVT1-218ENST00000523328 OR2I1PQ8NGU4 316 aa24.11■■□□□ 1.45
PVT1-218ENST00000523328 USP28Q96RU2 1077 aa24.11■■□□□ 1.45
PVT1-218ENST00000523328 TRIM9Q9C026 710 aa24.11■■□□□ 1.45
PVT1-218ENST00000523328 TNMDQ9H2S6 317 aa24.11■■□□□ 1.45
PVT1-218ENST00000523328 KBTBD4Q9NVX7 518 aa24.11■■□□□ 1.45
PVT1-218ENST00000523328 NXF1Q9UBU9 619 aaKnown RBP24.11■■□□□ 1.45
PVT1-218ENST00000523328 ANKRD11Q6UB99 2663 aaPredicted RBP24.1■■□□□ 1.45
PVT1-218ENST00000523328 H0Y626 953 aa24.1■■□□□ 1.45
PVT1-218ENST00000523328 TRIM16O95361 564 aa24.1■■□□□ 1.45
PVT1-218ENST00000523328 CD59P13987 128 aa24.1■■□□□ 1.45
PVT1-218ENST00000523328 WASP42768 502 aa24.1■■□□□ 1.45
PVT1-218ENST00000523328 NUDT18Q6ZVK8 323 aa24.1■■□□□ 1.45
PVT1-218ENST00000523328 RABEPKQ7Z6M1 372 aa24.1■■□□□ 1.45
PVT1-218ENST00000523328 GMIPQ9P107 970 aa24.1■■□□□ 1.45
PVT1-218ENST00000523328 ARHGAP33O14559 1287 aa24.09■■□□□ 1.45
PVT1-218ENST00000523328 CLIC2O15247 247 aa24.09■■□□□ 1.45
PVT1-218ENST00000523328 GREM1O60565 184 aa24.09■■□□□ 1.45
PVT1-218ENST00000523328 CAPNS1P04632 268 aa24.09■■□□□ 1.45
PVT1-218ENST00000523328 NDUFV2P19404 249 aa24.09■■□□□ 1.45
PVT1-218ENST00000523328 E2F4Q16254 413 aa24.09■■□□□ 1.45
PVT1-218ENST00000523328 EGFLAMQ63HQ2 1017 aa24.09■■□□□ 1.45
PVT1-218ENST00000523328 CHCHD4Q8N4Q1 142 aa24.09■■□□□ 1.45
PVT1-218ENST00000523328 ACOX2Q99424 681 aa24.09■■□□□ 1.45
PVT1-218ENST00000523328 SMYD3Q9H7B4 428 aa24.09■■□□□ 1.45
PVT1-218ENST00000523328 DMAP1Q9NPF5 467 aaPredicted RBP24.09■■□□□ 1.45
PVT1-218ENST00000523328 DNAAF2Q9NVR5 837 aaKnown RBP24.09■■□□□ 1.45
PVT1-218ENST00000523328 LHX6Q9UPM6 363 aa24.09■■□□□ 1.45
PVT1-218ENST00000523328 TAF4O00268 1085 aa24.08■■□□□ 1.45
PVT1-218ENST00000523328 ZNF217O75362 1048 aa24.08■■□□□ 1.45
PVT1-218ENST00000523328 IRF1P10914 325 aa24.08■■□□□ 1.45
PVT1-218ENST00000523328 SYT1P21579 422 aa24.08■■□□□ 1.45
PVT1-218ENST00000523328 ATICP31939 592 aa24.08■■□□□ 1.45
PVT1-218ENST00000523328 PGFP49763 221 aa24.08■■□□□ 1.45
PVT1-218ENST00000523328 CYP2J2P51589 502 aa24.08■■□□□ 1.45
PVT1-218ENST00000523328 CDH8P55286 799 aa24.08■■□□□ 1.45
PVT1-218ENST00000523328 TRPC3Q13507 836 aa24.08■■□□□ 1.45
PVT1-218ENST00000523328 RAB44Q7Z6P3 723 aaPredicted RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms