RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 ALDH7A1P49419 539 aaKnown RBP3.33□□□□□ -1.88
PCM1-217ENST00000522998 RPL36AP83881 106 aaKnown RBP3.33□□□□□ -1.88
PCM1-217ENST00000522998 PPATQ06203 517 aa3.33□□□□□ -1.88
PCM1-217ENST00000522998 ABCB5Q2M3G0 1257 aa3.33□□□□□ -1.88
PCM1-217ENST00000522998 EFCAB2Q5VUJ9 269 aa3.33□□□□□ -1.88
PCM1-217ENST00000522998 IQCF1Q8N6M8 205 aa3.33□□□□□ -1.88
PCM1-217ENST00000522998 SCNM1Q9BWG6 230 aa3.33□□□□□ -1.88
PCM1-217ENST00000522998 MYLK2Q9H1R3 596 aa3.33□□□□□ -1.88
PCM1-217ENST00000522998 DECR2Q9NUI1 292 aa3.33□□□□□ -1.88
PCM1-217ENST00000522998 TMEM45AQ9NWC5 275 aa3.33□□□□□ -1.88
PCM1-217ENST00000522998 GAR1Q9NY12 217 aaKnown RBP3.33□□□□□ -1.88
PCM1-217ENST00000522998 MYO1CO00159 1063 aa3.32□□□□□ -1.88
PCM1-217ENST00000522998 INPPL1O15357 1258 aa3.32□□□□□ -1.88
PCM1-217ENST00000522998 DTNBO60941 627 aa3.32□□□□□ -1.88
PCM1-217ENST00000522998 NDUFB8O95169 186 aa3.32□□□□□ -1.88
PCM1-217ENST00000522998 XRCC6P12956 609 aaKnown RBP eCLIP3.32□□□□□ -1.88
PCM1-217ENST00000522998 GAS1P54826 345 aa3.32□□□□□ -1.88
PCM1-217ENST00000522998 UCP3P55916 312 aa3.32□□□□□ -1.88
PCM1-217ENST00000522998 RRP1P56182 461 aaKnown RBP3.32□□□□□ -1.88
PCM1-217ENST00000522998 WNT3P56703 355 aa3.32□□□□□ -1.88
PCM1-217ENST00000522998 KRT85P78386 507 aa3.32□□□□□ -1.88
PCM1-217ENST00000522998 AMPD3Q01432 767 aa3.32□□□□□ -1.88
PCM1-217ENST00000522998 SLC14A1Q13336 389 aa3.32□□□□□ -1.88
PCM1-217ENST00000522998 KEAP1Q14145 624 aa3.32□□□□□ -1.88
PCM1-217ENST00000522998 PCBP2Q15366 365 aaKnown RBP eCLIP3.32□□□□□ -1.88
PCM1-217ENST00000522998 OTUD3Q5T2D3 398 aaPredicted RBP3.32□□□□□ -1.88
PCM1-217ENST00000522998 DCAF12L1Q5VU92 463 aa3.32□□□□□ -1.88
PCM1-217ENST00000522998 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.32□□□□□ -1.88
PCM1-217ENST00000522998 MIER2Q8N344 545 aa3.32□□□□□ -1.88
PCM1-217ENST00000522998 ZCRB1Q8TBF4 217 aaKnown RBP3.32□□□□□ -1.88
PCM1-217ENST00000522998 NEUROG1Q92886 237 aa3.32□□□□□ -1.88
PCM1-217ENST00000522998 MIB2Q96AX9 1013 aa3.32□□□□□ -1.88
PCM1-217ENST00000522998 MESP1Q9BRJ9 268 aa3.32□□□□□ -1.88
PCM1-217ENST00000522998 TUBB6Q9BUF5 446 aa3.32□□□□□ -1.88
PCM1-217ENST00000522998 DRG1Q9Y295 367 aaKnown RBP3.32□□□□□ -1.88
PCM1-217ENST00000522998 C2CD4BA6NLJ0 364 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 H3BUI4 141 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 EPN2O95208 641 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 PLGP00747 810 aaPredicted RBP3.31□□□□□ -1.88
PCM1-217ENST00000522998 CREB1P16220 341 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 NCLP19338 710 aaKnown RBP3.31□□□□□ -1.88
PCM1-217ENST00000522998 MAP2K6P52564 334 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 P2RX3P56373 397 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 MFSD13AQ14CX5 517 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 PTPROQ16827 1216 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 CERCAMQ5T4B2 595 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 NPNTQ6UXI9 565 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 PNMA8AQ86V59 439 aaPredicted RBP3.31□□□□□ -1.88
PCM1-217ENST00000522998 TMEM199Q8N511 208 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 BPIFB1Q8TDL5 484 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 GPATCH3Q96I76 525 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 HIC2Q96JB3 615 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 FAM126AQ9BYI3 521 aaPredicted RBP3.31□□□□□ -1.88
PCM1-217ENST00000522998 GBA2Q9HCG7 927 aaPredicted RBP3.31□□□□□ -1.88
PCM1-217ENST00000522998 PCDH12Q9NPG4 1184 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 MGAT4CQ9UBM8 478 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 ICAM5Q9UMF0 924 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 PCDHA7Q9UN72 937 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 COG5Q9UP83 839 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 COL4A3BPQ9Y5P4 624 aa3.31□□□□□ -1.88
PCM1-217ENST00000522998 TMEM272A0A1B0GTI8 110 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 SHTN1A0MZ66 631 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 ZNF814B7Z6K7 855 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 CLIC1O00299 241 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 SPTLC2O15270 562 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 TMPRSS11DO60235 418 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 HOXB2P14652 356 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 TBXAS1P24557 533 aaPredicted RBP3.3□□□□□ -1.88
PCM1-217ENST00000522998 SLC11A2P49281 568 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 ENTPD1P49961 510 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 CFHR3Q02985 330 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 LTBQ06643 244 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 PLS1Q14651 629 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 PFKFB3Q16875 520 aaPredicted RBP3.3□□□□□ -1.88
PCM1-217ENST00000522998 FAM110CQ1W6H9 321 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 EARS2Q5JPH6 523 aaKnown RBP3.3□□□□□ -1.88
PCM1-217ENST00000522998 KHDC1LQ5JSQ8 128 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 SYDE2Q5VT97 1194 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 NECAB2Q7Z6G3 386 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 COL23A1Q86Y22 540 aaPredicted RBP3.3□□□□□ -1.88
PCM1-217ENST00000522998 PPP2R3CQ969Q6 453 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 CTHRC1Q96CG8 243 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 SARS2Q9NP81 518 aaKnown RBP3.3□□□□□ -1.88
PCM1-217ENST00000522998 PCDHA6Q9UN73 950 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 USP22Q9UPT9 525 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 ATP8A1Q9Y2Q0 1164 aa3.3□□□□□ -1.88
PCM1-217ENST00000522998 NOP58Q9Y2X3 529 aaKnown RBP3.3□□□□□ -1.88
PCM1-217ENST00000522998 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.3□□□□□ -1.88
PCM1-217ENST00000522998 SPRY2O43597 315 aa3.29□□□□□ -1.88
PCM1-217ENST00000522998 TLX3O43711 291 aaPredicted RBP3.29□□□□□ -1.88
PCM1-217ENST00000522998 ZC3H11AO75152 810 aaKnown RBP eCLIP3.29□□□□□ -1.88
PCM1-217ENST00000522998 ZNF432O94892 652 aa3.29□□□□□ -1.88
PCM1-217ENST00000522998 PDCP20941 246 aa3.29□□□□□ -1.88
PCM1-217ENST00000522998 POLD2P49005 469 aa3.29□□□□□ -1.88
PCM1-217ENST00000522998 CCNIQ14094 377 aa3.29□□□□□ -1.88
PCM1-217ENST00000522998 PTGR1Q14914 329 aa3.29□□□□□ -1.88
PCM1-217ENST00000522998 KRT71Q3SY84 523 aa3.29□□□□□ -1.88
PCM1-217ENST00000522998 CCDC157Q569K6 752 aa3.29□□□□□ -1.88
PCM1-217ENST00000522998 FAM57BQ71RH2 274 aa3.29□□□□□ -1.88
PCM1-217ENST00000522998 GAS2L3Q86XJ1 694 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms