RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 DMAP1Q9NPF5 467 aaPredicted RBP16.36■□□□□ 0.21
MRPS28-209ENST00000522987 EXOC1Q9NV70 894 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 ANGPTL2Q9UKU9 493 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 ATP8B3O60423 1300 aa16.36■□□□□ 0.21
MRPS28-209ENST00000522987 TCRBV21S2A2A0A5A6 115 aa16.35■□□□□ 0.21
MRPS28-209ENST00000522987 MAP3K13O43283 966 aa16.35■□□□□ 0.21
MRPS28-209ENST00000522987 STAU1O95793 577 aaKnown RBP16.35■□□□□ 0.21
MRPS28-209ENST00000522987 C4BPAP04003 597 aaKnown RBP16.35■□□□□ 0.21
MRPS28-209ENST00000522987 PMLP29590 882 aa16.35■□□□□ 0.21
MRPS28-209ENST00000522987 NOVA1P51513 510 aaKnown RBP16.35■□□□□ 0.21
MRPS28-209ENST00000522987 NDST1P52848 882 aa16.35■□□□□ 0.21
MRPS28-209ENST00000522987 MAP3K7CLP57077 242 aa16.35■□□□□ 0.21
MRPS28-209ENST00000522987 MRPS21P82921 87 aaKnown RBP16.35■□□□□ 0.21
MRPS28-209ENST00000522987 KMT5BQ4FZB7 885 aa16.35■□□□□ 0.21
MRPS28-209ENST00000522987 CEP135Q66GS9 1140 aa16.35■□□□□ 0.21
MRPS28-209ENST00000522987 C12orf56Q8IXR9 622 aa16.35■□□□□ 0.21
MRPS28-209ENST00000522987 C12orf29Q8N999 325 aa16.35■□□□□ 0.21
MRPS28-209ENST00000522987 PDZD8Q8NEN9 1154 aa16.35■□□□□ 0.21
MRPS28-209ENST00000522987 ZMIZ2Q8NF64 920 aa16.35■□□□□ 0.21
MRPS28-209ENST00000522987 SLC2A14Q8TDB8 520 aa16.35■□□□□ 0.21
MRPS28-209ENST00000522987 SMARCD1Q96GM5 515 aa16.35■□□□□ 0.21
MRPS28-209ENST00000522987 SMOQ99835 787 aa16.35■□□□□ 0.21
MRPS28-209ENST00000522987 FSCN3Q9NQT6 498 aa16.35■□□□□ 0.21
MRPS28-209ENST00000522987 USP24Q9UPU5 2620 aa16.34■□□□□ 0.21
MRPS28-209ENST00000522987 PVALEFA0A1B0GWK0 134 aa16.34■□□□□ 0.21
MRPS28-209ENST00000522987 TBC1D3BA6NDS4 549 aa16.34■□□□□ 0.21
MRPS28-209ENST00000522987 TNFRSF10BO14763 440 aa16.34■□□□□ 0.21
MRPS28-209ENST00000522987 KHNYNO15037 678 aaKnown RBP16.34■□□□□ 0.21
MRPS28-209ENST00000522987 ACTN4O43707 911 aaKnown RBP16.34■□□□□ 0.21
MRPS28-209ENST00000522987 ADAM23O75077 832 aa16.34■□□□□ 0.21
MRPS28-209ENST00000522987 TBX18O95935 607 aa16.34■□□□□ 0.21
MRPS28-209ENST00000522987 CHRM1P11229 460 aaPredicted RBP16.34■□□□□ 0.21
MRPS28-209ENST00000522987 SPINK2P20155 84 aa16.34■□□□□ 0.21
MRPS28-209ENST00000522987 KIR2DL1P43626 348 aaPredicted RBP16.34■□□□□ 0.21
MRPS28-209ENST00000522987 SNRPFP62306 86 aaKnown RBP16.34■□□□□ 0.21
MRPS28-209ENST00000522987 IRX4P78413 519 aa16.34■□□□□ 0.21
MRPS28-209ENST00000522987 GPRIN1Q7Z2K8 1008 aa16.34■□□□□ 0.21
MRPS28-209ENST00000522987 DDX42Q86XP3 938 aaKnown RBP eCLIP16.34■□□□□ 0.21
MRPS28-209ENST00000522987 TMEM25Q86YD3 366 aa16.34■□□□□ 0.21
MRPS28-209ENST00000522987 HSCBQ8IWL3 235 aa16.34■□□□□ 0.21
MRPS28-209ENST00000522987 CCDC26Q8TAB7 109 aa16.34■□□□□ 0.21
MRPS28-209ENST00000522987 PAGE5Q96GU1 130 aa16.34■□□□□ 0.21
MRPS28-209ENST00000522987 MMRN2Q9H8L6 949 aa16.34■□□□□ 0.21
MRPS28-209ENST00000522987 TBC1D14Q9P2M4 693 aa16.34■□□□□ 0.21
MRPS28-209ENST00000522987 MBD1Q9UIS9 605 aaPredicted RBP16.34■□□□□ 0.21
MRPS28-209ENST00000522987 NUDT5Q9UKK9 219 aa16.34■□□□□ 0.21
MRPS28-209ENST00000522987 A0A1B0GVL5 298 aa16.33■□□□□ 0.2
MRPS28-209ENST00000522987 E2F8A0AVK6 867 aa16.33■□□□□ 0.2
MRPS28-209ENST00000522987 MDM4O15151 490 aa16.33■□□□□ 0.2
MRPS28-209ENST00000522987 TULP3O75386 442 aa16.33■□□□□ 0.2
MRPS28-209ENST00000522987 ALDH1A2O94788 518 aa16.33■□□□□ 0.2
MRPS28-209ENST00000522987 TOP3BO95985 862 aaKnown RBP16.33■□□□□ 0.2
MRPS28-209ENST00000522987 NR3C1P04150 777 aa16.33■□□□□ 0.2
MRPS28-209ENST00000522987 FAM163BP0C2L3 166 aa16.33■□□□□ 0.2
MRPS28-209ENST00000522987 GRIA2P42262 883 aa16.33■□□□□ 0.2
MRPS28-209ENST00000522987 PIK3CAP42336 1068 aa16.33■□□□□ 0.2
MRPS28-209ENST00000522987 PTGER3P43115 390 aa16.33■□□□□ 0.2
MRPS28-209ENST00000522987 GAD2Q05329 585 aa16.33■□□□□ 0.2
MRPS28-209ENST00000522987 FOXC1Q12948 553 aa16.33■□□□□ 0.2
MRPS28-209ENST00000522987 C10orf76Q5T2E6 689 aa16.33■□□□□ 0.2
MRPS28-209ENST00000522987 BTBD8Q5XKL5 378 aa16.33■□□□□ 0.2
MRPS28-209ENST00000522987 PHTF2Q8N3S3 785 aa16.33■□□□□ 0.2
MRPS28-209ENST00000522987 BHMTQ93088 406 aa16.33■□□□□ 0.2
MRPS28-209ENST00000522987 TNIP3Q96KP6 325 aa16.33■□□□□ 0.2
MRPS28-209ENST00000522987 POLMQ9NP87 494 aaPredicted RBP16.33■□□□□ 0.2
MRPS28-209ENST00000522987 CGNQ9P2M7 1197 aaKnown RBP16.33■□□□□ 0.2
MRPS28-209ENST00000522987 KIF20AO95235 890 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 HLA-DRAP01903 254 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 PRR29P0C7W0 189 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 TRIM49P0CI25 452 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 TRIM49CP0CI26 452 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 P2RY2P41231 377 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 MAPK8P45983 427 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 ZNF252P-AS1Q0IIN9 211 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 EOGTQ5NDL2 527 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 SH3PXD2AQ5TCZ1 1133 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 TPGS1Q6ZTW0 290 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 MIB1Q86YT6 1006 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 ZNF513Q8N8E2 541 aaPredicted RBP16.32■□□□□ 0.2
MRPS28-209ENST00000522987 OLIG1Q8TAK6 271 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 WHAMMQ8TF30 809 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 TWNKQ96RR1 684 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 KCTD10Q9H3F6 313 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 VRTNQ9H8Y1 702 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 TMEM9BQ9NQ34 198 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 SPHK2Q9NRA0 654 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 TMEM74BQ9NUR3 256 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 DMAC2Q9NW81 257 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 RALYQ9UKM9 306 aaKnown RBP16.32■□□□□ 0.2
MRPS28-209ENST00000522987 MAPK8IP1Q9UQF2 711 aa16.32■□□□□ 0.2
MRPS28-209ENST00000522987 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.31■□□□□ 0.2
MRPS28-209ENST00000522987 NEDD8-MDP1E9PL57 170 aa16.31■□□□□ 0.2
MRPS28-209ENST00000522987 CDX4O14627 284 aaPredicted RBP16.31■□□□□ 0.2
MRPS28-209ENST00000522987 CYP26A1O43174 497 aa16.31■□□□□ 0.2
MRPS28-209ENST00000522987 TLR5O60602 858 aa16.31■□□□□ 0.2
MRPS28-209ENST00000522987 SLFN14P0C7P3 912 aa16.31■□□□□ 0.2
MRPS28-209ENST00000522987 PFKFB1P16118 471 aa16.31■□□□□ 0.2
MRPS28-209ENST00000522987 CD58P19256 250 aa16.31■□□□□ 0.2
MRPS28-209ENST00000522987 EIF2DP41214 584 aaKnown RBP16.31■□□□□ 0.2
MRPS28-209ENST00000522987 TRIM61Q5EBN2 209 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms