RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 C18orf25Q96B23 403 aaPredicted RBP6.75□□□□□ -1.33
PABPC1-220ENST00000522658 C8orf76Q96K31 380 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 ZSWIM3Q96MP5 696 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 CITED4Q96RK1 184 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 TMEM209Q96SK2 561 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 ACO2Q99798 780 aaKnown RBP6.75□□□□□ -1.33
PABPC1-220ENST00000522658 TIPINQ9BVW5 301 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 TARS2Q9BW92 718 aaKnown RBP6.75□□□□□ -1.33
PABPC1-220ENST00000522658 DNAJC25Q9H1X3 360 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 KIF9Q9HAQ2 790 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 TRPV4Q9HBA0 871 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 VPS45Q9NRW7 570 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 DDX19AQ9NUU7 478 aaKnown RBP6.75□□□□□ -1.33
PABPC1-220ENST00000522658 OBP2AQ9NY56 170 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 UBQLN1Q9UMX0 589 aaKnown RBP6.75□□□□□ -1.33
PABPC1-220ENST00000522658 PCDHGA5Q9Y5G8 931 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 VWA8A3KMH1 1905 aa6.75□□□□□ -1.33
PABPC1-220ENST00000522658 FRYLO94915 3013 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 ZNF292O60281 2723 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 NCOR2Q9Y618 2525 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 SLC16A4O15374 487 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 NDUFB5O43674 189 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 TOM1L1O75674 476 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 AKAP3O75969 853 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 FAM87AP0C7U9 286 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 ZNF806P0C7X5 589 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 CXCL8P10145 99 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 CD8BP10966 210 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 KCNE1P15382 129 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 FUT4P22083 530 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 TGM1P22735 817 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 PMLP29590 882 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 NPTX2P47972 431 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 PXNP49023 591 aaPredicted RBP6.74□□□□□ -1.33
PABPC1-220ENST00000522658 TUFMP49411 452 aaKnown RBP6.74□□□□□ -1.33
PABPC1-220ENST00000522658 LIG4P49917 911 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 GUCY1B3Q02153 619 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 CREB5Q02930 508 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 ZNF252P-AS1Q0IIN9 211 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 DUSP4Q13115 394 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 ZNF174Q15697 407 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 FBXO43Q4G163 708 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 TTC38Q5R3I4 469 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 N4BP2L1Q5TBK1 243 aaPredicted RBP6.74□□□□□ -1.33
PABPC1-220ENST00000522658 NT5DC1Q5TFE4 455 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 C11orf74Q86VG3 221 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 THEM5Q8N1Q8 247 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 CPA6Q8N4T0 437 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 NECAB1Q8N987 351 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 RASSF8Q8NHQ8 419 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 MRPS31Q92665 395 aaKnown RBP6.74□□□□□ -1.33
PABPC1-220ENST00000522658 GTF3C6Q969F1 213 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 ZFYVE19Q96K21 471 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 MTMR9Q96QG7 549 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 TMEM60Q9H2L4 133 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 TASP1Q9H6P5 420 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 RPF1Q9H9Y2 349 aaKnown RBP6.74□□□□□ -1.33
PABPC1-220ENST00000522658 C17orf75Q9HAS0 396 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 KRT82Q9NSB4 513 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 GTSE1Q9NYZ3 720 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 CEP72Q9P209 647 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 TUBGCP4Q9UGJ1 667 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 DSEQ9UL01 958 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 R3HCC1Q9Y3T6 440 aaKnown RBP6.74□□□□□ -1.33
PABPC1-220ENST00000522658 TIMM13Q9Y5L4 95 aaPredicted RBP6.74□□□□□ -1.33
PABPC1-220ENST00000522658 CEP250Q9BV73 2442 aa6.74□□□□□ -1.33
PABPC1-220ENST00000522658 CCDC163A0A0D9SF12 145 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 MTMR11A4FU01 709 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 TMEM8BA6NDV4 472 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 K7ESF4 209 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 EIF1AYO14602 144 aaKnown RBP6.73□□□□□ -1.33
PABPC1-220ENST00000522658 HNRNPDLO14979 420 aaKnown RBP6.73□□□□□ -1.33
PABPC1-220ENST00000522658 APBB3O95704 486 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 EDN1P05305 212 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 OR4Q2P0C623 313 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 TYMPP19971 482 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 PAX3P23760 479 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 DDX6P26196 483 aaKnown RBP eCLIP6.73□□□□□ -1.33
PABPC1-220ENST00000522658 IFNAR2P48551 515 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 ATXN3P54252 364 aaPredicted RBP6.73□□□□□ -1.33
PABPC1-220ENST00000522658 EPHA5P54756 1037 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 ANAPC15P60006 121 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 SHC2P98077 582 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 CYP4F8P98187 520 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 TSPY1Q01534 308 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 ID3Q02535 119 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 FCHO2Q0JRZ9 810 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 MYBPC2Q14324 1141 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 SLC39A12Q504Y0 691 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 LMBRD2Q68DH5 695 aaPredicted RBP6.73□□□□□ -1.33
PABPC1-220ENST00000522658 UNQ6494/PRO21346Q6UXR6 183 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 ATG4DQ86TL0 474 aaPredicted RBP6.73□□□□□ -1.33
PABPC1-220ENST00000522658 PDZD3Q86UT5 571 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 KBTBD6Q86V97 674 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 SMYD4Q8IYR2 804 aaPredicted RBP6.73□□□□□ -1.33
PABPC1-220ENST00000522658 FAM181AQ8N9Y4 354 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 NSUN7Q8NE18 718 aaKnown RBP6.73□□□□□ -1.33
PABPC1-220ENST00000522658 PSMG2Q969U7 264 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 ZNF560Q96MR9 790 aa6.73□□□□□ -1.33
PABPC1-220ENST00000522658 CXCL16Q9H2A7 254 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms