RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 STAU1O95793 577 aaKnown RBP13.07□□□□□ -0.32
BRF2-204ENST00000522539 CST3P01034 146 aaPredicted RBP13.07□□□□□ -0.32
BRF2-204ENST00000522539 PTPN1P18031 435 aaKnown RBP13.07□□□□□ -0.32
BRF2-204ENST00000522539 YWHAQP27348 245 aa13.07□□□□□ -0.32
BRF2-204ENST00000522539 RDXP35241 583 aaKnown RBP13.07□□□□□ -0.32
BRF2-204ENST00000522539 HOXD13P35453 343 aa13.07□□□□□ -0.32
BRF2-204ENST00000522539 ATXN3P54252 364 aaPredicted RBP13.07□□□□□ -0.32
BRF2-204ENST00000522539 ZNF33AQ06730 810 aa13.07□□□□□ -0.32
BRF2-204ENST00000522539 PREPLQ4J6C6 727 aaPredicted RBP13.07□□□□□ -0.32
BRF2-204ENST00000522539 NUP93Q8N1F7 819 aa13.07□□□□□ -0.32
BRF2-204ENST00000522539 CHCHD4Q8N4Q1 142 aa13.07□□□□□ -0.32
BRF2-204ENST00000522539 MINDY1Q8N5J2 469 aa13.07□□□□□ -0.32
BRF2-204ENST00000522539 ZNF419Q96HQ0 510 aaPredicted RBP13.07□□□□□ -0.32
BRF2-204ENST00000522539 DPEP3Q9H4B8 488 aa13.07□□□□□ -0.32
BRF2-204ENST00000522539 SPHK2Q9NRA0 654 aa13.07□□□□□ -0.32
BRF2-204ENST00000522539 PANK4Q9NVE7 773 aa13.07□□□□□ -0.32
BRF2-204ENST00000522539 DEC1Q9P2X7 70 aa13.07□□□□□ -0.32
BRF2-204ENST00000522539 CIZ1Q9ULV3 898 aaPredicted RBP13.07□□□□□ -0.32
BRF2-204ENST00000522539 SMC3Q9UQE7 1217 aa13.07□□□□□ -0.32
BRF2-204ENST00000522539 R3HCC1Q9Y3T6 440 aaKnown RBP13.07□□□□□ -0.32
BRF2-204ENST00000522539 GPSM3Q9Y4H4 160 aa13.07□□□□□ -0.32
BRF2-204ENST00000522539 CLIC4Q9Y696 253 aa13.07□□□□□ -0.32
BRF2-204ENST00000522539 NBEAQ8NFP9 2946 aa13.07□□□□□ -0.32
BRF2-204ENST00000522539 CEP192Q8TEP8 1941 aa13.07□□□□□ -0.32
BRF2-204ENST00000522539 ADAMTS9Q9P2N4 1935 aa13.07□□□□□ -0.32
BRF2-204ENST00000522539 A0A087X0B3 334 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 GREM1O60565 184 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 ZNF217O75362 1048 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 RTN3O95197 1032 aaPredicted RBP13.06□□□□□ -0.32
BRF2-204ENST00000522539 ABL1P00519 1130 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 IDEP14735 1019 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 NTSR1P30989 418 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 HECTD3Q5T447 861 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 HS2ST1Q7LGA3 356 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 BBS7Q8IWZ6 715 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 PGBD3Q8N328 593 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 NAT16Q8N8M0 369 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 B3GALNT2Q8NCR0 500 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 ADAMTS14Q8WXS8 1223 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 CLIC6Q96NY7 704 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 MMS19Q96T76 1030 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 GABRG3Q99928 467 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 GTPBP2Q9BX10 602 aaKnown RBP13.06□□□□□ -0.32
BRF2-204ENST00000522539 B3GNT5Q9BYG0 378 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 GZF1Q9H116 711 aaPredicted RBP13.06□□□□□ -0.32
BRF2-204ENST00000522539 XYLT2Q9H1B5 865 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 SNX25Q9H3E2 840 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 KIAA1586Q9HCI6 787 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 HSPBP1Q9NZL4 362 aa13.06□□□□□ -0.32
BRF2-204ENST00000522539 CLDN5O00501 218 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 TRIM24O15164 1050 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 CACNG3O60359 315 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 SYPP08247 313 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 HOXB2P14652 356 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 NDUFV2P19404 249 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 C10orf76Q5T2E6 689 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 BTBD8Q5XKL5 378 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 CCDC73Q6ZRK6 1079 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 PAQR9Q6ZVX9 377 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 TMEM25Q86YD3 366 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 DEFB119Q8N690 84 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 SPRYD3Q8NCJ5 442 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 GLIS3Q8NEA6 775 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 OR2I1PQ8NGU4 316 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 OR6B3Q8NGW1 331 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 NOC3LQ8WTT2 800 aaKnown RBP13.05□□□□□ -0.32
BRF2-204ENST00000522539 FBXO32Q969P5 355 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 WBP2Q969T9 261 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 KCNK16Q96T55 309 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 COMMD8Q9NX08 183 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 MARK1Q9P0L2 795 aa13.05□□□□□ -0.32
BRF2-204ENST00000522539 ADAMTS20P59510 1910 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 TULP1O00294 542 aaPredicted RBP13.04□□□□□ -0.32
BRF2-204ENST00000522539 TGFB1I1O43294 461 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 CBFA2T3O75081 653 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 TXLNAP40222 546 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 SCAPQ12770 1279 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 PSMD6Q15008 389 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 TRIP6Q15654 476 aaKnown RBP13.04□□□□□ -0.32
BRF2-204ENST00000522539 SNRNP35Q16560 246 aaKnown RBP13.04□□□□□ -0.32
BRF2-204ENST00000522539 WDR72Q3MJ13 1102 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 EGFLAMQ63HQ2 1017 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 CCNI2Q6ZMN8 369 aaPredicted RBP13.04□□□□□ -0.32
BRF2-204ENST00000522539 NUDT18Q6ZVK8 323 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 HTR3DQ70Z44 454 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 EPM2AIP1Q7L775 607 aaPredicted RBP13.04□□□□□ -0.32
BRF2-204ENST00000522539 GLRX5Q86SX6 157 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 TRIML1Q8N9V2 468 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 SCAMP5Q8TAC9 235 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 IPO4Q8TEX9 1081 aaKnown RBP13.04□□□□□ -0.32
BRF2-204ENST00000522539 HSPA12BQ96MM6 686 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 CAMK1GQ96NX5 476 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 ACOX2Q99424 681 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 CGRRF1Q99675 332 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 FAM124BQ9H5Z6 455 aaPredicted RBP13.04□□□□□ -0.32
BRF2-204ENST00000522539 CCSER2Q9H7U1 834 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 VRTNQ9H8Y1 702 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 CHORDC1Q9UHD1 332 aaPredicted RBP13.04□□□□□ -0.32
BRF2-204ENST00000522539 SH3BP1Q9Y3L3 701 aa13.04□□□□□ -0.32
BRF2-204ENST00000522539 NFE2L3Q9Y4A8 694 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms