RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 ADGRG1Q9Y653 693 aa17.08■□□□□ 0.32
LSM1-204ENST00000522515 TCRBV5S1A1TA0A578 114 aa17.07■□□□□ 0.32
LSM1-204ENST00000522515 RCCD1A6NED2 376 aa17.07■□□□□ 0.32
LSM1-204ENST00000522515 GJB6O95452 261 aa17.07■□□□□ 0.32
LSM1-204ENST00000522515 RHOP08100 348 aa17.07■□□□□ 0.32
LSM1-204ENST00000522515 MYBL1P10243 752 aa17.07■□□□□ 0.32
LSM1-204ENST00000522515 GSCP56915 257 aaPredicted RBP17.07■□□□□ 0.32
LSM1-204ENST00000522515 GPC5P78333 572 aa17.07■□□□□ 0.32
LSM1-204ENST00000522515 KRT83P78385 493 aa17.07■□□□□ 0.32
LSM1-204ENST00000522515 NTHL1P78549 312 aa17.07■□□□□ 0.32
LSM1-204ENST00000522515 FAM102AQ5T9C2 384 aaPredicted RBP17.07■□□□□ 0.32
LSM1-204ENST00000522515 GPR149Q86SP6 731 aa17.07■□□□□ 0.32
LSM1-204ENST00000522515 TMEM150AQ86TG1 271 aa17.07■□□□□ 0.32
LSM1-204ENST00000522515 MON1AQ86VX9 555 aa17.07■□□□□ 0.32
LSM1-204ENST00000522515 C3orf20Q8ND61 904 aa17.07■□□□□ 0.32
LSM1-204ENST00000522515 IRGQQ8WZA9 623 aa17.07■□□□□ 0.32
LSM1-204ENST00000522515 KHSRPQ92945 711 aaKnown RBP eCLIP17.07■□□□□ 0.32
LSM1-204ENST00000522515 TRIM11Q96F44 468 aa17.07■□□□□ 0.32
LSM1-204ENST00000522515 S1PR5Q9H228 398 aa17.07■□□□□ 0.32
LSM1-204ENST00000522515 NMUR1Q9HB89 426 aa17.07■□□□□ 0.32
LSM1-204ENST00000522515 ASAH2Q9NR71 780 aa17.07■□□□□ 0.32
LSM1-204ENST00000522515 MYO1AQ9UBC5 1043 aa17.07■□□□□ 0.32
LSM1-204ENST00000522515 UXTQ9UBK9 157 aaPredicted RBP17.07■□□□□ 0.32
LSM1-204ENST00000522515 A0A1W2PQH9 124 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 SART1O43290 800 aaKnown RBP17.06■□□□□ 0.32
LSM1-204ENST00000522515 TADA3O75528 432 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 GRAP2O75791 330 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 F11P03951 625 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 TMEM253P0C7T8 217 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 ZDHHC11BP0C7U3 371 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 MYL4P12829 197 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 GABRR2P28476 465 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 CCR2P41597 374 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 EPHA5P54756 1037 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 PLEKHA7Q6IQ23 1121 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 GAREM2Q75VX8 874 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 SLC26A9Q7LBE3 791 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 CTNNBL1Q8WYA6 563 aaPredicted RBP17.06■□□□□ 0.32
LSM1-204ENST00000522515 FAM149B1Q96BN6 582 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 DOCK6Q96HP0 2047 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 MSLNLQ96KJ4 702 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 LUC7LQ9NQ29 371 aaKnown RBP17.06■□□□□ 0.32
LSM1-204ENST00000522515 OSER1Q9NX31 292 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 INTUQ9ULD6 942 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.06■□□□□ 0.32
LSM1-204ENST00000522515 C2orf16Q68DN1 1984 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 A0A0U1RQJ8 604 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 NRG2O14511 850 aaPredicted RBP17.06■□□□□ 0.32
LSM1-204ENST00000522515 LTFP02788 710 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 CYP1A2P05177 515 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 SCNN1AP37088 669 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 YWHAGP61981 247 aaKnown RBP eCLIP17.06■□□□□ 0.32
LSM1-204ENST00000522515 MAMLD1Q13495 774 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 SKIV2LQ15477 1246 aaKnown RBP17.06■□□□□ 0.32
LSM1-204ENST00000522515 PABPC1LQ4VXU2 614 aaKnown RBP17.06■□□□□ 0.32
LSM1-204ENST00000522515 EFHC1Q5JVL4 640 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 PPP1R15BQ5SWA1 713 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 BSPRYQ5W0U4 402 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 DNAJC24Q6P3W2 148 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 PDZD8Q8NEN9 1154 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 ATRIPQ8WXE1 791 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 OVCA2Q8WZ82 227 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 TCEAL4Q96EI5 215 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 ADAM7Q9H2U9 754 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 AVENQ9NQS1 362 aaPredicted RBP17.06■□□□□ 0.32
LSM1-204ENST00000522515 TLR8Q9NR97 1041 aaKnown RBP17.06■□□□□ 0.32
LSM1-204ENST00000522515 METTL5Q9NRN9 209 aaKnown RBP17.06■□□□□ 0.32
LSM1-204ENST00000522515 PARVAQ9NVD7 372 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 TRPM5Q9NZQ8 1165 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 TMEM59LQ9UK28 342 aa17.06■□□□□ 0.32
LSM1-204ENST00000522515 XIRP2A4UGR9 3374 aa17.05■□□□□ 0.32
LSM1-204ENST00000522515 NOTCH4Q99466 2003 aa17.05■□□□□ 0.32
LSM1-204ENST00000522515 A0A1W2PRU2 124 aa17.05■□□□□ 0.32
LSM1-204ENST00000522515 ZNF840PA6NDX5 716 aa17.05■□□□□ 0.32
LSM1-204ENST00000522515 SIGLEC16A6NMB1 481 aa17.05■□□□□ 0.32
LSM1-204ENST00000522515 ABL1P00519 1130 aa17.05■□□□□ 0.32
LSM1-204ENST00000522515 FYNP06241 537 aa17.05■□□□□ 0.32
LSM1-204ENST00000522515 KRT3P12035 628 aa17.05■□□□□ 0.32
LSM1-204ENST00000522515 GJA1P17302 382 aa17.05■□□□□ 0.32
LSM1-204ENST00000522515 VAV2P52735 878 aa17.05■□□□□ 0.32
LSM1-204ENST00000522515 RNASE9P60153 205 aaKnown RBP17.05■□□□□ 0.32
LSM1-204ENST00000522515 YWHAZP63104 245 aaKnown RBP17.05■□□□□ 0.32
LSM1-204ENST00000522515 ITIH3Q06033 890 aa17.05■□□□□ 0.32
LSM1-204ENST00000522515 SLC5A9Q2M3M2 681 aa17.05■□□□□ 0.32
LSM1-204ENST00000522515 PDZD4Q76G19 769 aaPredicted RBP17.05■□□□□ 0.32
LSM1-204ENST00000522515 KIAA1328Q86T90 577 aa17.05■□□□□ 0.32
LSM1-204ENST00000522515 LEMD2Q8NC56 503 aa17.05■□□□□ 0.32
LSM1-204ENST00000522515 JOSD2Q8TAC2 188 aa17.05■□□□□ 0.32
LSM1-204ENST00000522515 EDEM1Q92611 657 aa17.05■□□□□ 0.32
LSM1-204ENST00000522515 SELENOOQ9BVL4 669 aa17.05■□□□□ 0.32
LSM1-204ENST00000522515 LACRTQ9GZZ8 138 aa17.05■□□□□ 0.32
LSM1-204ENST00000522515 ASNSD1Q9NWL6 643 aa17.05■□□□□ 0.32
LSM1-204ENST00000522515 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.04■□□□□ 0.32
LSM1-204ENST00000522515 HSF2BPO75031 334 aa17.04■□□□□ 0.32
LSM1-204ENST00000522515 MOSPD3O75425 235 aa17.04■□□□□ 0.32
LSM1-204ENST00000522515 GLI1P08151 1106 aa17.04■□□□□ 0.32
LSM1-204ENST00000522515 RFC1P35251 1148 aaPredicted RBP17.04■□□□□ 0.32
LSM1-204ENST00000522515 PSEN1P49768 467 aa17.04■□□□□ 0.32
LSM1-204ENST00000522515 RPL7AP62424 266 aaKnown RBP17.04■□□□□ 0.32
LSM1-204ENST00000522515 CYP4F8P98187 520 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms