RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-215	ENST00000522115	NAPRT	Q6XQN6	538 aa		5.09	□□□□□ -1.59
PTPN12-215	ENST00000522115	DPY19L3	Q6ZPD9	716 aa		5.09	□□□□□ -1.59
PTPN12-215	ENST00000522115	BCDIN3D	Q7Z5W3	292 aa	Known RBP	5.09	□□□□□ -1.59
PTPN12-215	ENST00000522115	DPP9	Q86TI2	863 aa		5.09	□□□□□ -1.59
PTPN12-215	ENST00000522115	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	5.09	□□□□□ -1.59
PTPN12-215	ENST00000522115	CYP2W1	Q8TAV3	490 aa		5.09	□□□□□ -1.59
PTPN12-215	ENST00000522115	ZBTB45	Q96K62	511 aa	Predicted RBP	5.09	□□□□□ -1.59
PTPN12-215	ENST00000522115	MACROD1	Q9BQ69	325 aa		5.09	□□□□□ -1.59
PTPN12-215	ENST00000522115	NAA15	Q9BXJ9	866 aa	Known RBP	5.09	□□□□□ -1.59
PTPN12-215	ENST00000522115	CIPC	Q9C0C6	399 aa		5.09	□□□□□ -1.59
PTPN12-215	ENST00000522115	HEYL	Q9NQ87	328 aa	Predicted RBP	5.09	□□□□□ -1.59
PTPN12-215	ENST00000522115	STARD7	Q9NQZ5	370 aa		5.09	□□□□□ -1.59
PTPN12-215	ENST00000522115	SNX15	Q9NRS6	342 aa		5.09	□□□□□ -1.59
PTPN12-215	ENST00000522115	HPSE	Q9Y251	543 aa		5.09	□□□□□ -1.59
PTPN12-215	ENST00000522115		A0A087WZ62	844 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	POM121B	A6NF01	834 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	BTBD19	C9JJ37	291 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	AGPS	O00116	658 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	EXOC5	O00471	708 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	KPNA5	O15131	536 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	CELA2A	P08217	269 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	NHLRC4	P0CG21	123 aa	Predicted RBP	5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	FGFR2	P21802	821 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	FPR3	P25089	353 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	CERS1	P27544	350 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	RBL1	P28749	1068 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	SLC5A2	P31639	672 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	ITGA8	P53708	1063 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	STK3	Q13188	491 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	KCNAB1	Q14722	419 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	ST3GAL2	Q16842	350 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	PRAMEF17	Q5VTA0	474 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	USP49	Q70CQ1	688 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	BEND5	Q7L4P6	421 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	KRT73	Q86Y46	540 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	BRI3BP	Q8WY22	251 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	HIST1H2AA	Q96QV6	131 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	EIF2A	Q9BY44	585 aa	Known RBP	5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	ARNT2	Q9HBZ2	717 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	ZBTB26	Q9HCK0	441 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	TFCP2L1	Q9NZI6	479 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	STEAP1	Q9UHE8	339 aa		5.08	□□□□□ -1.6
PTPN12-215	ENST00000522115	TCRBV5S1A1T	A0A578	114 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	PRRT4	C9JH25	899 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	POC1B-GALNT4	F8VUJ3	575 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	PRC1	O43663	620 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	SNX2	O60749	519 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	PDE8B	O95263	885 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	MYL4	P12829	197 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	HTR7	P34969	479 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	STT3A	P46977	705 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	DIO1	P49895	249 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	RENBP	P51606	427 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	TBX4	P57082	545 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	GRM1	Q13255	1194 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	ZNF782	Q6ZMW2	699 aa	Predicted RBP	5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	CHSY1	Q86X52	802 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	GALNT4	Q8N4A0	578 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	METTL25	Q8N6Q8	603 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	RITA1	Q96K30	269 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	ASB2	Q96Q27	587 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	FYTTD1	Q96QD9	318 aa	Known RBP	5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	ASIC5	Q9NY37	505 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	NKX1-2	Q9UD57	310 aa	Predicted RBP	5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	FAM50B	Q9Y247	325 aa		5.07	□□□□□ -1.6
PTPN12-215	ENST00000522115	UBE2Q2L	H0YL09	131 aa		5.06	□□□□□ -1.6
PTPN12-215	ENST00000522115	CES2	O00748	559 aa		5.06	□□□□□ -1.6
PTPN12-215	ENST00000522115	USP1	O94782	785 aa		5.06	□□□□□ -1.6
PTPN12-215	ENST00000522115	MT-CO3	P00414	261 aa		5.06	□□□□□ -1.6
PTPN12-215	ENST00000522115	KRT18	P05783	430 aa	Known RBP	5.06	□□□□□ -1.6
PTPN12-215	ENST00000522115	APEH	P13798	732 aa	Known RBP	5.06	□□□□□ -1.6
PTPN12-215	ENST00000522115	CREB1	P16220	341 aa		5.06	□□□□□ -1.6
PTPN12-215	ENST00000522115	SSBP2	P81877	361 aa	Predicted RBP	5.06	□□□□□ -1.6
PTPN12-215	ENST00000522115	LMAN2	Q12907	356 aa		5.06	□□□□□ -1.6
PTPN12-215	ENST00000522115	CCAR1	Q8IX12	1150 aa	Known RBP	5.06	□□□□□ -1.6
PTPN12-215	ENST00000522115	C8orf58	Q8NAV2	365 aa		5.06	□□□□□ -1.6
PTPN12-215	ENST00000522115	NGDN	Q8NEJ9	315 aa	Known RBP	5.06	□□□□□ -1.6
PTPN12-215	ENST00000522115	ADAMTS18	Q8TE60	1221 aa		5.06	□□□□□ -1.6
PTPN12-215	ENST00000522115	MMS19	Q96T76	1030 aa		5.06	□□□□□ -1.6
PTPN12-215	ENST00000522115	GDF15	Q99988	308 aa		5.06	□□□□□ -1.6
PTPN12-215	ENST00000522115	MAGEB5	Q9BZ81	275 aa		5.06	□□□□□ -1.6
PTPN12-215	ENST00000522115	SLC27A6	Q9Y2P4	619 aa		5.06	□□□□□ -1.6
PTPN12-215	ENST00000522115	PCSK5	Q92824	1860 aa		5.06	□□□□□ -1.6
PTPN12-215	ENST00000522115	RASA4B	C9J798	803 aa		5.05	□□□□□ -1.6
PTPN12-215	ENST00000522115		H3BNC9	293 aa		5.05	□□□□□ -1.6
PTPN12-215	ENST00000522115	APOL1	O14791	398 aa		5.05	□□□□□ -1.6
PTPN12-215	ENST00000522115	RASA4	O43374	803 aa		5.05	□□□□□ -1.6
PTPN12-215	ENST00000522115	EXOC3	O60645	756 aa		5.05	□□□□□ -1.6
PTPN12-215	ENST00000522115	FGF18	O76093	207 aa		5.05	□□□□□ -1.6
PTPN12-215	ENST00000522115	TUBB4A	P04350	444 aa		5.05	□□□□□ -1.6
PTPN12-215	ENST00000522115	MYL1	P05976	194 aa		5.05	□□□□□ -1.6
PTPN12-215	ENST00000522115	ADRA1D	P25100	572 aa		5.05	□□□□□ -1.6
PTPN12-215	ENST00000522115	MCM5	P33992	734 aa		5.05	□□□□□ -1.6
PTPN12-215	ENST00000522115	SRSF4	Q08170	494 aa	Known RBP	5.05	□□□□□ -1.6
PTPN12-215	ENST00000522115	ACOX1	Q15067	660 aa		5.05	□□□□□ -1.6
PTPN12-215	ENST00000522115	KLHDC7A	Q5VTJ3	777 aa		5.05	□□□□□ -1.6
PTPN12-215	ENST00000522115	MRNIP	Q6NTE8	343 aa		5.05	□□□□□ -1.6
PTPN12-215	ENST00000522115	ZNF66	Q6ZN08	573 aa		5.05	□□□□□ -1.6
PTPN12-215	ENST00000522115	CCDC33	Q8N5R6	958 aa		5.05	□□□□□ -1.6
PTPN12-215	ENST00000522115	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	5.05	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms