RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	MAN2B1	O00754	1011 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	OLFM2	O95897	454 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	TBX18	O95935	607 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	HMBS	P08397	361 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	SETSIP	P0DME0	302 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	RALA	P11233	206 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	RARG	P13631	454 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	GLUL	P15104	373 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	CDK11B	P21127	795 aa	Known RBP	8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	CTH	P32929	405 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	KLK7	P49862	253 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	ZNF132	P52740	706 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	SLC7A9	P82251	487 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	RUNX3	Q13761	415 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	ITPRIPL2	Q3MIP1	535 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	C10orf120	Q5SQS8	335 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	CDKAL1	Q5VV42	579 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	TXNDC11	Q6PKC3	985 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	LCLAT1	Q6UWP7	414 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	RSRC2	Q7L4I2	434 aa	Known RBP	8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	ENOSF1	Q7L5Y1	443 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	CCDC186	Q7Z3E2	898 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	MIB1	Q86YT6	1006 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	PASD1	Q8IV76	773 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	SIX6OS1	Q8N1H7	587 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	CPA6	Q8N4T0	437 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	ANKRD20A12P	Q8NF67	263 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	PCMTD1	Q96MG8	357 aa	Predicted RBP	8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	ZSWIM1	Q9BR11	485 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	C8orf33	Q9H7E9	229 aa	Predicted RBP	8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	ST7	Q9NRC1	585 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	RBM12	Q9NTZ6	932 aa	Known RBP	8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	FAM86C1	Q9NVL1	165 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	IL37	Q9NZH6	218 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	MRPS17	Q9Y2R5	130 aa	Known RBP	8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	FHOD1	Q9Y613	1164 aa		8.8	□□□□□ -1
CTNNA1-231	ENST00000521941	OTOL1	A6NHN0	477 aa	Predicted RBP	8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	BECN2	A8MW95	431 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	MED7	O43513	233 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	GALR2	O43603	387 aa	Predicted RBP	8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	ZDHHC11B	P0C7U3	371 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	PFKL	P17858	780 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	ATP5C1	P36542	298 aa	Known RBP	8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	PLA2G4A	P47712	749 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	TUB	P50607	506 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	COPB1	P53618	953 aa	Known RBP	8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	YWHAG	P61981	247 aa	Known RBP eCLIP	8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	KCNMA1	Q12791	1236 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	EFEMP1	Q12805	493 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	PDGFRL	Q15198	375 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	STIL	Q15468	1287 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	CNGA2	Q16280	664 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	KLHL40	Q2TBA0	621 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	EML3	Q32P44	896 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	FKBP15	Q5T1M5	1219 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	BTBD8	Q5XKL5	378 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	NAIF1	Q69YI7	327 aa	Predicted RBP	8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	DENND1B	Q6P3S1	775 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	SCD5	Q86SK9	330 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	DDX42	Q86XP3	938 aa	Known RBP eCLIP	8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	DTWD2	Q8NBA8	298 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	CLEC4C	Q8WTT0	213 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	OSCP1	Q8WVF1	389 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	SHC3	Q92529	594 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	EDEM1	Q92611	657 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	ATP2A3	Q93084	1043 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	WBP2	Q969T9	261 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	ZFR	Q96KR1	1074 aa	Known RBP	8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	FAM81B	Q96LP2	452 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	FAM83C	Q9BQN1	747 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	DDX23	Q9BUQ8	820 aa	Known RBP	8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	MIS12	Q9H081	205 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	NAT10	Q9H0A0	1025 aa	Known RBP	8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	LINC00597	Q9H2U6	94 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	ECT2	Q9H8V3	914 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	TRPV5	Q9NQA5	729 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	SPATA6	Q9NWH7	488 aa	Predicted RBP	8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	KIAA1257	Q9ULG3	409 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	USP3	Q9Y6I4	520 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	MYOF	Q9NZM1	2061 aa		8.79	□□□□□ -1
CTNNA1-231	ENST00000521941	ATG2B	Q96BY7	2078 aa		8.78	□□□□□ -1
CTNNA1-231	ENST00000521941	SHISA7	A6NL88	538 aa		8.78	□□□□□ -1
CTNNA1-231	ENST00000521941	NCAM2	O15394	837 aa		8.78	□□□□□ -1
CTNNA1-231	ENST00000521941	NFATC1	O95644	943 aa		8.78	□□□□□ -1
CTNNA1-231	ENST00000521941	ZBED1	O96006	694 aa		8.78	□□□□□ -1
CTNNA1-231	ENST00000521941	CYP17A1	P05093	508 aa		8.78	□□□□□ -1
CTNNA1-231	ENST00000521941	ATP1A3	P13637	1013 aa		8.78	□□□□□ -1
CTNNA1-231	ENST00000521941	PTMS	P20962	102 aa		8.78	□□□□□ -1
CTNNA1-231	ENST00000521941	GJA4	P35212	333 aa		8.78	□□□□□ -1
CTNNA1-231	ENST00000521941	PSEN1	P49768	467 aa		8.78	□□□□□ -1
CTNNA1-231	ENST00000521941	PTPN5	P54829	565 aa		8.78	□□□□□ -1
CTNNA1-231	ENST00000521941	DAOA	P59103	153 aa		8.78	□□□□□ -1
CTNNA1-231	ENST00000521941	GOLGA8F	Q08AF8	430 aa		8.78	□□□□□ -1
CTNNA1-231	ENST00000521941	GOLGA8DP	Q0D2H9	430 aa		8.78	□□□□□ -1
CTNNA1-231	ENST00000521941	TCF15	Q12870	199 aa		8.78	□□□□□ -1
CTNNA1-231	ENST00000521941	DRAP1	Q14919	205 aa	Predicted RBP	8.78	□□□□□ -1
CTNNA1-231	ENST00000521941	NCAPH	Q15003	741 aa		8.78	□□□□□ -1
CTNNA1-231	ENST00000521941	ANGPT1	Q15389	498 aa		8.78	□□□□□ -1
CTNNA1-231	ENST00000521941	PKDCC	Q504Y2	493 aa		8.78	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms