RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 TCERG1LQ5VWI1 586 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 SYT13Q7L8C5 426 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 ZC3H3Q8IXZ2 948 aaKnown RBP11.35□□□□□ -0.59
PVT1-209ENST00000520913 SPATA20Q8TB22 786 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 GAB3Q8WWW8 586 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 EZH1Q92800 747 aaPredicted RBP11.35□□□□□ -0.59
PVT1-209ENST00000520913 JAKMIP2Q96AA8 810 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 RMDN1Q96DB5 314 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 CYFIP2Q96F07 1278 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 EEF2KMTQ96G04 330 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 HHIPQ96QV1 700 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 DUSP9Q99956 384 aaKnown RBP11.35□□□□□ -0.59
PVT1-209ENST00000520913 NACA2Q9H009 215 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 RAB20Q9NX57 234 aa11.35□□□□□ -0.59
PVT1-209ENST00000520913 MYO18AQ92614 2054 aaKnown RBP11.35□□□□□ -0.59
PVT1-209ENST00000520913 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.34□□□□□ -0.59
PVT1-209ENST00000520913 PSMA7O14818 248 aa11.34□□□□□ -0.59
PVT1-209ENST00000520913 SCAMP3O14828 347 aaKnown RBP11.34□□□□□ -0.59
PVT1-209ENST00000520913 HRO43593 1189 aa11.34□□□□□ -0.59
PVT1-209ENST00000520913 RPP40O75818 363 aaKnown RBP11.34□□□□□ -0.59
PVT1-209ENST00000520913 CCDC192P0DO97 292 aa11.34□□□□□ -0.59
PVT1-209ENST00000520913 IRF1P10914 325 aa11.34□□□□□ -0.59
PVT1-209ENST00000520913 SDHBP21912 280 aa11.34□□□□□ -0.59
PVT1-209ENST00000520913 PPP1R2P41236 205 aa11.34□□□□□ -0.59
PVT1-209ENST00000520913 FKBP3Q00688 224 aaKnown RBP11.34□□□□□ -0.59
PVT1-209ENST00000520913 GOLGA8FQ08AF8 430 aa11.34□□□□□ -0.59
PVT1-209ENST00000520913 GOLGA8DPQ0D2H9 430 aa11.34□□□□□ -0.59
PVT1-209ENST00000520913 SPEM2Q0P670 501 aa11.34□□□□□ -0.59
PVT1-209ENST00000520913 DMC1Q14565 340 aa11.34□□□□□ -0.59
PVT1-209ENST00000520913 PUM1Q14671 1186 aaKnown RBP eCLIP11.34□□□□□ -0.59
PVT1-209ENST00000520913 GPRIN1Q7Z2K8 1008 aa11.34□□□□□ -0.59
PVT1-209ENST00000520913 ADGRG2Q8IZP9 1017 aa11.34□□□□□ -0.59
PVT1-209ENST00000520913 WHAMMQ8TF30 809 aa11.34□□□□□ -0.59
PVT1-209ENST00000520913 PARD6AQ9NPB6 346 aa11.34□□□□□ -0.59
PVT1-209ENST00000520913 DLL3Q9NYJ7 618 aa11.34□□□□□ -0.59
PVT1-209ENST00000520913 CHORDC1Q9UHD1 332 aaPredicted RBP11.34□□□□□ -0.59
PVT1-209ENST00000520913 SCML2Q9UQR0 700 aa11.34□□□□□ -0.59
PVT1-209ENST00000520913 NYNRINQ9P2P1 1898 aaKnown RBP11.34□□□□□ -0.59
PVT1-209ENST00000520913 TRIM49BA6NDI0 452 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 PRR5-ARHGAP8B1AHC4 643 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 HHLA1C9JL84 531 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 AXIN1O15169 862 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 CYP26A1O43174 497 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 APBB3O95704 486 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 APODP05090 189 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 ACO1P21399 889 aaKnown RBP11.33□□□□□ -0.6
PVT1-209ENST00000520913 HOXC13P31276 330 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 PXNP49023 591 aaPredicted RBP11.33□□□□□ -0.6
PVT1-209ENST00000520913 PSEN1P49768 467 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 SEC13P55735 322 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 ARHGAP8P85298 464 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 GAD2Q05329 585 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 RSPO4Q2I0M5 234 aaPredicted RBP11.33□□□□□ -0.6
PVT1-209ENST00000520913 CBWD6Q4V339 395 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 ZNF394Q53GI3 561 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 CBWD3Q5JTY5 395 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 CBWD5Q5RIA9 395 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 PPP1R26Q5T8A7 1209 aaPredicted RBP11.33□□□□□ -0.6
PVT1-209ENST00000520913 FAM160A2Q8N612 972 aaPredicted RBP11.33□□□□□ -0.6
PVT1-209ENST00000520913 SEMA4DQ92854 862 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 ERCC4Q92889 916 aaPredicted RBP11.33□□□□□ -0.6
PVT1-209ENST00000520913 PNKPQ96T60 521 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 CYLDQ9NQC7 956 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 CISHQ9NSE2 258 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 ARMCX3Q9UH62 379 aaPredicted RBP11.33□□□□□ -0.6
PVT1-209ENST00000520913 LSM7Q9UK45 103 aaKnown RBP11.33□□□□□ -0.6
PVT1-209ENST00000520913 CDV3Q9UKY7 258 aaKnown RBP11.33□□□□□ -0.6
PVT1-209ENST00000520913 MMP17Q9ULZ9 603 aa11.33□□□□□ -0.6
PVT1-209ENST00000520913 K7EQS6 105 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 HOXC11O43248 304 aaPredicted RBP11.32□□□□□ -0.6
PVT1-209ENST00000520913 FOXD2O60548 495 aaPredicted RBP11.32□□□□□ -0.6
PVT1-209ENST00000520913 KAT7O95251 611 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 TGM1P22735 817 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 ATP5C1P36542 298 aaKnown RBP11.32□□□□□ -0.6
PVT1-209ENST00000520913 KIF11P52732 1056 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 PMS1P54277 932 aaKnown RBP11.32□□□□□ -0.6
PVT1-209ENST00000520913 YWHAEP62258 255 aaKnown RBP11.32□□□□□ -0.6
PVT1-209ENST00000520913 MRPS21P82921 87 aaKnown RBP11.32□□□□□ -0.6
PVT1-209ENST00000520913 KDSRQ06136 332 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 HSF5Q4G112 596 aaPredicted RBP11.32□□□□□ -0.6
PVT1-209ENST00000520913 PREPLQ4J6C6 727 aaPredicted RBP11.32□□□□□ -0.6
PVT1-209ENST00000520913 LY6G5CQ5SRR4 150 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 BTBD8Q5XKL5 378 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 ANKRD40Q6AI12 368 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 RHBDF2Q6PJF5 856 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 DGLUCYQ7Z3D6 616 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 CCDC186Q7Z3E2 898 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 CACNA2D4Q7Z3S7 1137 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 TADA2BQ86TJ2 420 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 C12orf40Q86WS4 652 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 BBS7Q8IWZ6 715 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 ELOA2Q8IYF1 753 aaPredicted RBP11.32□□□□□ -0.6
PVT1-209ENST00000520913 SLC4A11Q8NBS3 891 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 TSTD1Q8NFU3 115 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 USP33Q8TEY7 942 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 TMEM176AQ96HP8 235 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 LOXL4Q96JB6 756 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 CDK5RAP1Q96SZ6 601 aaKnown RBP11.32□□□□□ -0.6
PVT1-209ENST00000520913 ARID3AQ99856 593 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 DUSP16Q9BY84 665 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms