RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 BMP1P13497 986 aa16.11■□□□□ 0.17
LSM1-203ENST00000520755 CEBPBP17676 345 aa16.11■□□□□ 0.17
LSM1-203ENST00000520755 YWHAQP27348 245 aa16.11■□□□□ 0.17
LSM1-203ENST00000520755 NSFP46459 744 aaKnown RBP16.11■□□□□ 0.17
LSM1-203ENST00000520755 TEAD2Q15562 447 aa16.11■□□□□ 0.17
LSM1-203ENST00000520755 CCDC122Q5T0U0 273 aa16.11■□□□□ 0.17
LSM1-203ENST00000520755 GAREM2Q75VX8 874 aa16.11■□□□□ 0.17
LSM1-203ENST00000520755 SHKBP1Q8TBC3 707 aa16.11■□□□□ 0.17
LSM1-203ENST00000520755 ATRIPQ8WXE1 791 aa16.11■□□□□ 0.17
LSM1-203ENST00000520755 KCTD13Q8WZ19 329 aa16.11■□□□□ 0.17
LSM1-203ENST00000520755 PIWIL1Q96J94 861 aaKnown RBP16.11■□□□□ 0.17
LSM1-203ENST00000520755 MYRFLQ96LU7 910 aa16.11■□□□□ 0.17
LSM1-203ENST00000520755 UBXN6Q9BZV1 441 aa16.11■□□□□ 0.17
LSM1-203ENST00000520755 PYCARDQ9ULZ3 195 aa16.11■□□□□ 0.17
LSM1-203ENST00000520755 TFR2Q9UP52 801 aa16.11■□□□□ 0.17
LSM1-203ENST00000520755 NUP210Q8TEM1 1887 aaPredicted RBP16.1■□□□□ 0.17
LSM1-203ENST00000520755 ATMINO43313 823 aaPredicted RBP16.1■□□□□ 0.17
LSM1-203ENST00000520755 MOSPD3O75425 235 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 FTLP02792 175 aaPredicted RBP16.1■□□□□ 0.17
LSM1-203ENST00000520755 CDC25CP30307 473 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 GABRB2P47870 512 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 CYP4F8P98187 520 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 ADIGQ0VDE8 80 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 TAF10Q12962 218 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 OTOP3Q7RTS5 596 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 BHLHA9Q7RTU4 235 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 TMEM110Q86TL2 294 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 NPAS3Q8IXF0 933 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 MCOLN2Q8IZK6 566 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 TDRD5Q8NAT2 981 aaKnown RBP16.1■□□□□ 0.17
LSM1-203ENST00000520755 CLEC4CQ8WTT0 213 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 FGF13Q92913 245 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 FBXO32Q969P5 355 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 MCRS1Q96EZ8 462 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 PPP1R13BQ96KQ4 1090 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 HSFY1Q96LI6 401 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 MYADMQ96S97 322 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 TTLL2Q9BWV7 592 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 SLITRK6Q9H5Y7 841 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 CYLDQ9NQC7 956 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 NR2E1Q9Y466 385 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 ADGRG1Q9Y653 693 aa16.1■□□□□ 0.17
LSM1-203ENST00000520755 TCRBV5S1A1TA0A578 114 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 RCCD1A6NED2 376 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 C2CD4DB7Z1M9 353 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 PAPSS1O43252 624 aaPredicted RBP16.09■□□□□ 0.17
LSM1-203ENST00000520755 TADA3O75528 432 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 ABL1P00519 1130 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 F11P03951 625 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 GALCP54803 685 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 GSCP56915 257 aaPredicted RBP16.09■□□□□ 0.17
LSM1-203ENST00000520755 C1QBPQ07021 282 aaKnown RBP16.09■□□□□ 0.17
LSM1-203ENST00000520755 ARHGAP15Q53QZ3 475 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 STXBP5Q5T5C0 1151 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 FAM183BPQ6ZVS7 135 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 TMEM150AQ86TG1 271 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 ERICH1Q86X53 443 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 XYLT1Q86Y38 959 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 ADHFE1Q8IWW8 467 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 ACSF2Q96CM8 615 aaPredicted RBP16.09■□□□□ 0.17
LSM1-203ENST00000520755 ARHGEF26Q96DR7 871 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 SLITRK1Q96PX8 696 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 ULBP1Q9BZM6 244 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 FBXO44Q9H4M3 255 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 LRRC4Q9HBW1 653 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 ST7Q9NRC1 585 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 COMMD8Q9NX08 183 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.09■□□□□ 0.17
LSM1-203ENST00000520755 IL37Q9NZH6 218 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 TRPM5Q9NZQ8 1165 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 ADAM22Q9P0K1 906 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 CDH7Q9ULB5 785 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 USP3Q9Y6I4 520 aa16.09■□□□□ 0.17
LSM1-203ENST00000520755 SLC34A2O95436 690 aa16.08■□□□□ 0.16
LSM1-203ENST00000520755 LCP1P13796 627 aa16.08■□□□□ 0.16
LSM1-203ENST00000520755 ABCB4P21439 1286 aa16.08■□□□□ 0.16
LSM1-203ENST00000520755 RRM1P23921 792 aa16.08■□□□□ 0.16
LSM1-203ENST00000520755 TKTL1P51854 596 aa16.08■□□□□ 0.16
LSM1-203ENST00000520755 ZP2Q05996 745 aa16.08■□□□□ 0.16
LSM1-203ENST00000520755 TJAP1Q5JTD0 557 aa16.08■□□□□ 0.16
LSM1-203ENST00000520755 GPR158Q5T848 1215 aa16.08■□□□□ 0.16
LSM1-203ENST00000520755 OLFML1Q6UWY5 402 aa16.08■□□□□ 0.16
LSM1-203ENST00000520755 SIX6OS1Q8N1H7 587 aa16.08■□□□□ 0.16
LSM1-203ENST00000520755 NDRG1Q92597 394 aaKnown RBP16.08■□□□□ 0.16
LSM1-203ENST00000520755 MRPS31Q92665 395 aaKnown RBP16.08■□□□□ 0.16
LSM1-203ENST00000520755 NOX5Q96PH1 765 aa16.08■□□□□ 0.16
LSM1-203ENST00000520755 THAP2Q9H0W7 228 aa16.08■□□□□ 0.16
LSM1-203ENST00000520755 TRPC7Q9HCX4 862 aa16.08■□□□□ 0.16
LSM1-203ENST00000520755 GMIPQ9P107 970 aa16.08■□□□□ 0.16
LSM1-203ENST00000520755 PRKAG3Q9UGI9 489 aa16.08■□□□□ 0.16
LSM1-203ENST00000520755 CHORDC1Q9UHD1 332 aaPredicted RBP16.08■□□□□ 0.16
LSM1-203ENST00000520755 USTQ9Y2C2 406 aa16.08■□□□□ 0.16
LSM1-203ENST00000520755 PCDHA13Q9Y5I0 950 aa16.08■□□□□ 0.16
LSM1-203ENST00000520755 FAM92AA1XBS5 289 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 NRDCO43847 1150 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 GJB6O95452 261 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 USP17L7P0C7H9 530 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 DEKP35659 375 aaKnown RBP16.07■□□□□ 0.16
LSM1-203ENST00000520755 MAGEA1P43355 309 aa16.07■□□□□ 0.16
LSM1-203ENST00000520755 ACADSBP45954 432 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms