RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 LARGE1O95461 756 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 TFRCP02786 760 aaKnown RBP6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 FAM163BP0C2L3 166 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 BMP7P18075 431 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 ADORA2AP29274 412 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 NTSR1P30989 418 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 ELF1P32519 619 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 RXRGP48443 463 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 SEC24CP53992 1094 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 ATXN1P54253 815 aaKnown RBP6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 TIRAPP58753 221 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 JAG1P78504 1218 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 SMAD1Q15797 465 aaKnown RBP6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 MAP3K21Q5TCX8 1036 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 BBS12Q6ZW61 710 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 DTX2Q86UW9 622 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 TRABD2AQ86V40 505 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 TMEM57Q8N5G2 664 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 RSPRY1Q96DX4 576 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 RNF31Q96EP0 1072 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 ZBTB45Q96K62 511 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 GPR20Q99678 358 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 PAAF1Q9BRP4 392 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 C17orf80Q9BSJ5 609 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 ALOXE3Q9BYJ1 711 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 AKIP1Q9NQ31 210 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 VPS45Q9NRW7 570 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 RXFP3Q9NSD7 469 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 TMEM160Q9NX00 188 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 STEAP1Q9UHE8 339 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 SLC27A6Q9Y2P4 619 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 SCINQ9Y6U3 715 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 ITIH6Q6UXX5 1313 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 TRGV11A0A075B6L2 103 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 OTOL1A6NHN0 477 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 DBX1A6NMT0 343 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 ZAR1LA6NP61 321 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 GATA3P23771 443 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 ACRV1P26436 265 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 BMPR1AP36894 532 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 CHRNDQ07001 517 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 TOB2Q14106 344 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 BEAN1Q3B7T3 259 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 DEPDC1Q5TB30 811 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 FAAH2Q6GMR7 532 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 RAB11FIP4Q86YS3 637 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 FSTL5Q8N475 847 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 USP38Q8NB14 1042 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 PCYOX1LQ8NBM8 494 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 C3orf49Q96BT1 292 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 COG8Q96MW5 612 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 TWNKQ96RR1 684 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 BRD8Q9H0E9 1235 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 JMJD4Q9H9V9 463 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 NOD2Q9HC29 1040 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 TMLHEQ9NVH6 421 aa6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 DRG1Q9Y295 367 aaKnown RBP6.05□□□□□ -1.44
HMGB1P46-201ENST00000520062 A6NLC8 198 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 E7EVH7 732 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 KIAA0355O15063 1070 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 PPP6R2O75170 966 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 RPP40O75818 363 aaKnown RBP6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 NCR1O76036 304 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 CDKL5O76039 1030 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 ITGB3P05106 788 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 CNPP09543 421 aaKnown RBP6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 JUPP14923 745 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 SERPINA4P29622 427 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 KRT9P35527 623 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 CCR5P51681 352 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 EIF5P55010 431 aaKnown RBP6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 SLC12A1Q13621 1099 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 RPS6KA2Q15349 733 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 ST3GAL2Q16842 350 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 TBRG1Q3YBR2 411 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 TEDDM1Q5T9Z0 273 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 DGAT2L7PQ6IED9 249 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 MSANTD2Q6P1R3 559 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 CLEC9AQ6UXN8 241 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 C1orf122Q6ZSJ8 110 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 RRAGAQ7L523 313 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 TMPRSS6Q8IU80 811 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 SYNE4Q8N205 404 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 LRRC71Q8N4P6 559 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 TSPYL6Q8N831 410 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 CSGALNACT1Q8TDX6 532 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 OVCA2Q8WZ82 227 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 HTRA1Q92743 480 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 GOLGA1Q92805 767 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 ACTRT3Q9BYD9 372 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 TPSD1Q9BZJ3 242 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 SERHL2Q9H4I8 314 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 CD248Q9HCU0 757 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 NKX1-2Q9UD57 310 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 DERAQ9Y315 318 aa6.04□□□□□ -1.44
HMGB1P46-201ENST00000520062 A8MVJ9 347 aa6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 PRICKLE3O43900 615 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 WDR47O94967 919 aa6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 CER1O95813 267 aa6.03□□□□□ -1.44
HMGB1P46-201ENST00000520062 DDX6P26196 483 aaKnown RBP eCLIP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms