RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 RTP2Q5QGT7 225 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 SH3PXD2AQ5TCZ1 1133 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 FBXO38Q6PIJ6 1188 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 KCNT2Q6UVM3 1135 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 VSTM1Q6UX27 236 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 SPOCD1Q6ZMY3 1216 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 OTOP2Q7RTS6 562 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 NDRG1Q92597 394 aaKnown RBP12.95□□□□□ -0.34
SPIDR-209ENST00000519141 IGSF21Q96ID5 467 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 STIM2Q9P246 746 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 RAB21Q9UL25 225 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 STAP1Q9ULZ2 295 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 NR2E1Q9Y466 385 aa12.95□□□□□ -0.34
SPIDR-209ENST00000519141 TCRBV7S2A1N4TA0A589 114 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 USP17L7P0C7H9 530 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 CHRNA3P32297 505 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 NOS2P35228 1153 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 PTPN7P35236 360 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 SULT1E1P49888 294 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 ARPP19P56211 112 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 MRPS25P82663 173 aaKnown RBP12.94□□□□□ -0.34
SPIDR-209ENST00000519141 LLGL1Q15334 1064 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 LRIT3Q3SXY7 679 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 DCAF6Q58WW2 860 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 KCNT1Q5JUK3 1230 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 WDR93Q6P2C0 686 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 SCYL2Q6P3W7 929 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 MFSD7Q6UXD7 560 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 SCN4BQ8IWT1 228 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 DEFB106AQ8N104 65 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 SCML4Q8N228 414 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 PRELID2Q8N945 189 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 CCDC26Q8TAB7 109 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 IRGQQ8WZA9 623 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 RAPGEF5Q92565 580 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 HSPH1Q92598 858 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 BADQ92934 168 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 SLC2A13Q96QE2 648 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 PEBP4Q96S96 227 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 YME1L1Q96TA2 773 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 TBCBQ99426 244 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 C11orf84Q9BUA3 381 aaPredicted RBP12.94□□□□□ -0.34
SPIDR-209ENST00000519141 POPDC2Q9HBU9 364 aa12.94□□□□□ -0.34
SPIDR-209ENST00000519141 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.94□□□□□ -0.34
SPIDR-209ENST00000519141 MRPL42Q9Y6G3 142 aaKnown RBP12.94□□□□□ -0.34
SPIDR-209ENST00000519141 YJEFN3A6XGL0 299 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 E7ENQ6 273 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 CAPN9O14815 690 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 TRIM66O15016 1216 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 RAD51CO43502 376 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 HEXIM1O94992 359 aaKnown RBP12.93□□□□□ -0.34
SPIDR-209ENST00000519141 FGBP02675 491 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 LTFP02788 710 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 RARAP10276 462 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 MAGEA11P43364 429 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 HDAC4P56524 1084 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 VSNL1P62760 191 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 SMARCB1Q12824 385 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 GPR17Q13304 367 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 BRD3Q15059 726 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 SIX1Q15475 284 aaPredicted RBP12.93□□□□□ -0.34
SPIDR-209ENST00000519141 CYP1B1Q16678 543 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 SLC25A52Q3SY17 297 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 TFDP3Q5H9I0 405 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 KIAA1841Q6NSI8 718 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 STRADAQ7RTN6 431 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 TAS1R1Q7RTX1 841 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 MAATS1Q7Z4T9 603 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 SLC39A11Q8N1S5 342 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 C12orf50Q8NA57 414 aaPredicted RBP12.93□□□□□ -0.34
SPIDR-209ENST00000519141 HDAC7Q8WUI4 952 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 TEKT4Q8WW24 435 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 CENPIQ92674 756 aaPredicted RBP12.93□□□□□ -0.34
SPIDR-209ENST00000519141 MAGOHBQ96A72 148 aaKnown RBP12.93□□□□□ -0.34
SPIDR-209ENST00000519141 TMEM169Q96HH4 297 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 LRCH3Q96II8 777 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 RUNDC3BQ96NL0 473 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 PGLYRP2Q96PD5 576 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 HERPUD2Q9BSE4 406 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 TRIM62Q9BVG3 475 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 HEMGNQ9BXL5 484 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 DMGDHQ9UI17 866 aaKnown RBP12.93□□□□□ -0.34
SPIDR-209ENST00000519141 UNC80Q8N2C7 3258 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 hCG_1818297A0A087WSY0 165 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 CCDC151A5D8V7 595 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 TBC1D4O60343 1298 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 ERLIN1O75477 346 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 TJP3O95049 919 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 EFEMP2O95967 443 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 TFE3P19532 575 aaPredicted RBP12.93□□□□□ -0.34
SPIDR-209ENST00000519141 KDELR1P24390 212 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 CDKN2BP42772 138 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 SLC5A3P53794 718 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 SLC7A5Q01650 507 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 KLF1Q13351 362 aaPredicted RBP12.93□□□□□ -0.34
SPIDR-209ENST00000519141 PSMD5Q16401 504 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 RAB6CQ53S08 254 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 BOLA3Q53S33 107 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 PM20D1Q6GTS8 502 aa12.93□□□□□ -0.34
SPIDR-209ENST00000519141 PSRC1Q6PGN9 363 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms