RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 ATP11CQ8NB49 1132 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 CTHRC1Q96CG8 243 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 LRRC46Q96FV0 321 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 WDYHV1Q96HA8 205 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 CCDC136Q96JN2 1154 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 RITA1Q96K30 269 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 ZNF668Q96K58 619 aaPredicted RBP4.46□□□□□ -1.7
SKP1-205ENST00000519054 HIST1H2AAQ96QV6 131 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 HEYLQ9NQ87 328 aaPredicted RBP4.46□□□□□ -1.7
SKP1-205ENST00000519054 DNAJB11Q9UBS4 358 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 RIMKLBQ9ULI2 386 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 CAPN11Q9UMQ6 739 aa4.46□□□□□ -1.7
SKP1-205ENST00000519054 H7C1Q1 480 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 SNX2O60749 519 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 CELA2AP08217 269 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 TSHRP16473 764 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 MPGP29372 298 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 STT3AP46977 705 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 DIO1P49895 249 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 CASP5P51878 434 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 COPB1P53618 953 aaKnown RBP4.45□□□□□ -1.7
SKP1-205ENST00000519054 IFIT5Q13325 482 aaKnown RBP4.45□□□□□ -1.7
SKP1-205ENST00000519054 HSP90AB2PQ58FF8 381 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 MZT2AQ6P582 158 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 USP49Q70CQ1 688 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 BCDIN3DQ7Z5W3 292 aaKnown RBP4.45□□□□□ -1.7
SKP1-205ENST00000519054 VGLL2Q8N8G2 317 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 ASB2Q96Q27 587 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 SH2D3AQ9BRG2 576 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 SNX15Q9NRS6 342 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 GJB4Q9NTQ9 266 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 ASIC5Q9NY37 505 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 FLRT1Q9NZU1 646 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 MGAT4CQ9UBM8 478 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 NKX1-2Q9UD57 310 aaPredicted RBP4.45□□□□□ -1.7
SKP1-205ENST00000519054 VPS51Q9UID3 782 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 SLC27A6Q9Y2P4 619 aa4.45□□□□□ -1.7
SKP1-205ENST00000519054 A0A087WZ62 844 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 POC1B-GALNT4F8VUJ3 575 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 M0R3H8 397 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 GCATO75600 419 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 LATS1O95835 1130 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 CD19P15391 556 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 FGFR2P21802 821 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 RBL1P28749 1068 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 ATICP31939 592 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 MCM5P33992 734 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 SRSF7Q16629 238 aaKnown RBP eCLIP4.44□□□□□ -1.7
SKP1-205ENST00000519054 CERKLQ49MI3 558 aaPredicted RBP4.44□□□□□ -1.7
SKP1-205ENST00000519054 CEP78Q5JTW2 689 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 DENND2CQ68D51 928 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 GALNT4Q8N4A0 578 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 RNF152Q8N8N0 203 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 PJA1Q8NG27 643 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 C5orf34Q96MH7 638 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 NAA15Q9BXJ9 866 aaKnown RBP4.44□□□□□ -1.7
SKP1-205ENST00000519054 SLC25A32Q9H2D1 315 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 TRIM36Q9NQ86 728 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 STEAP1Q9UHE8 339 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 ASAP1Q9ULH1 1129 aa4.44□□□□□ -1.7
SKP1-205ENST00000519054 TCRBV5S1A1TA0A578 114 aa4.43□□□□□ -1.7
SKP1-205ENST00000519054 UBE2Q2LH0YL09 131 aa4.43□□□□□ -1.7
SKP1-205ENST00000519054 APOL1O14791 398 aa4.43□□□□□ -1.7
SKP1-205ENST00000519054 TMPRSS11DO60235 418 aa4.43□□□□□ -1.7
SKP1-205ENST00000519054 APEHP13798 732 aaKnown RBP4.43□□□□□ -1.7
SKP1-205ENST00000519054 EPHB2P29323 1055 aa4.43□□□□□ -1.7
SKP1-205ENST00000519054 DEUP1Q05D60 604 aa4.43□□□□□ -1.7
SKP1-205ENST00000519054 EZH2Q15910 746 aaKnown RBP4.43□□□□□ -1.7
SKP1-205ENST00000519054 FAM187BQ17R55 369 aa4.43□□□□□ -1.7
SKP1-205ENST00000519054 KIAA1614Q5VZ46 1190 aa4.43□□□□□ -1.7
SKP1-205ENST00000519054 CRTC1Q6UUV9 634 aa4.43□□□□□ -1.7
SKP1-205ENST00000519054 CATSPERGQ6ZRH7 1159 aa4.43□□□□□ -1.7
SKP1-205ENST00000519054 FSTL5Q8N475 847 aaPredicted RBP4.43□□□□□ -1.7
SKP1-205ENST00000519054 MAFAQ8NHW3 353 aaPredicted RBP4.43□□□□□ -1.7
SKP1-205ENST00000519054 FAM227BQ96M60 508 aa4.43□□□□□ -1.7
SKP1-205ENST00000519054 SELENOOQ9BVL4 669 aa4.43□□□□□ -1.7
SKP1-205ENST00000519054 QTRT1Q9BXR0 403 aaKnown RBP4.43□□□□□ -1.7
SKP1-205ENST00000519054 ZCWPW1Q9H0M4 648 aa4.43□□□□□ -1.7
SKP1-205ENST00000519054 GEMIN8Q9NWZ8 242 aaKnown RBP4.43□□□□□ -1.7
SKP1-205ENST00000519054 DNAJC9-AS1A6NH13 148 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 AREL1O15033 823 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 CAND2O75155 1236 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 USP1O94782 785 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 MT-CO3P00414 261 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 KRT18P05783 430 aaKnown RBP4.42□□□□□ -1.7
SKP1-205ENST00000519054 CHRM5P08912 532 aaPredicted RBP4.42□□□□□ -1.7
SKP1-205ENST00000519054 PRR35P0CG20 571 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 CYP2A6P11509 494 aaPredicted RBP4.42□□□□□ -1.7
SKP1-205ENST00000519054 PHKG2P15735 406 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 COPAP53621 1224 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 EIF4A1P60842 406 aaKnown RBP4.42□□□□□ -1.7
SKP1-205ENST00000519054 HLTFQ14527 1009 aaKnown RBP eCLIP4.42□□□□□ -1.7
SKP1-205ENST00000519054 ST3GAL2Q16842 350 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 SUPT20HL1Q3ZLR7 823 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 AWAT1Q58HT5 328 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 TMEM65Q6PI78 240 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 KRT28Q7Z3Y7 464 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 YTHDF3Q7Z739 585 aaKnown RBP4.42□□□□□ -1.7
SKP1-205ENST00000519054 C8orf58Q8NAV2 365 aa4.42□□□□□ -1.7
SKP1-205ENST00000519054 NGDNQ8NEJ9 315 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms