RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 SLC24A5Q71RS6 500 aa17.33■□□□□ 0.37
PCM1-206ENST00000518537 MYCBPAPQ8TBZ2 947 aa17.33■□□□□ 0.37
PCM1-206ENST00000518537 NDRG1Q92597 394 aaKnown RBP17.33■□□□□ 0.37
PCM1-206ENST00000518537 CENPIQ92674 756 aaPredicted RBP17.33■□□□□ 0.37
PCM1-206ENST00000518537 PCED1BQ96HM7 432 aa17.33■□□□□ 0.37
PCM1-206ENST00000518537 ATP6V1G3Q96LB4 118 aa17.33■□□□□ 0.37
PCM1-206ENST00000518537 EPB41L4BQ9H329 900 aa17.33■□□□□ 0.37
PCM1-206ENST00000518537 SEMA4AQ9H3S1 761 aa17.33■□□□□ 0.37
PCM1-206ENST00000518537 DSEQ9UL01 958 aa17.33■□□□□ 0.37
PCM1-206ENST00000518537 HMGB1P1B2RPK0 211 aaPredicted RBP17.33■□□□□ 0.36
PCM1-206ENST00000518537 MDM4O15151 490 aa17.33■□□□□ 0.36
PCM1-206ENST00000518537 DAB1O75553 588 aa17.33■□□□□ 0.36
PCM1-206ENST00000518537 ZSCAN5DPP0CG00 497 aa17.33■□□□□ 0.36
PCM1-206ENST00000518537 ETS1P14921 441 aa17.33■□□□□ 0.36
PCM1-206ENST00000518537 CHKAP35790 457 aa17.33■□□□□ 0.36
PCM1-206ENST00000518537 MATKP42679 507 aa17.33■□□□□ 0.36
PCM1-206ENST00000518537 LMAN1P49257 510 aa17.33■□□□□ 0.36
PCM1-206ENST00000518537 EIF3EP60228 445 aaKnown RBP17.33■□□□□ 0.36
PCM1-206ENST00000518537 ADCY1Q08828 1119 aa17.33■□□□□ 0.36
PCM1-206ENST00000518537 GPS1Q13098 491 aa17.33■□□□□ 0.36
PCM1-206ENST00000518537 ERMARDQ5T6L9 678 aa17.33■□□□□ 0.36
PCM1-206ENST00000518537 DCLRE1AQ6PJP8 1040 aa17.33■□□□□ 0.36
PCM1-206ENST00000518537 DEFB106AQ8N104 65 aa17.33■□□□□ 0.36
PCM1-206ENST00000518537 GLIS1Q8NBF1 620 aa17.33■□□□□ 0.36
PCM1-206ENST00000518537 RNF157Q96PX1 679 aa17.33■□□□□ 0.36
PCM1-206ENST00000518537 C11orf84Q9BUA3 381 aaPredicted RBP17.33■□□□□ 0.36
PCM1-206ENST00000518537 PCDH18Q9HCL0 1135 aa17.33■□□□□ 0.36
PCM1-206ENST00000518537 TRIM17Q9Y577 477 aa17.33■□□□□ 0.36
PCM1-206ENST00000518537 ARHGEF37A1IGU5 675 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 DNALI1O14645 258 aaPredicted RBP17.32■□□□□ 0.36
PCM1-206ENST00000518537 MCF2LO15068 1137 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 INPPL1O15357 1258 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 IFNB1P01574 187 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 CYP11A1P05108 521 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 NUDT17P0C025 328 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 SULT1E1P49888 294 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 TKTL1P51854 596 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 HTRA3P83110 453 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 KRT71Q3SY84 523 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 CD300LGQ6UXG3 332 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 TRMT10CQ7L0Y3 403 aaKnown RBP17.32■□□□□ 0.36
PCM1-206ENST00000518537 ZNF771Q7L3S4 317 aaPredicted RBP17.32■□□□□ 0.36
PCM1-206ENST00000518537 SH2D3CQ8N5H7 860 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 SH3TC2Q8TF17 1288 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 RSAD2Q8WXG1 361 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 RSPH1Q8WYR4 309 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 SMOQ99835 787 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 PCDH9Q9HC56 1237 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 AAASQ9NRG9 546 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.32■□□□□ 0.36
PCM1-206ENST00000518537 TSC2P49815 1807 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 M0QZQ0 153 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 FBXO21O94952 628 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 PECAM1P16284 738 aaPredicted RBP17.32■□□□□ 0.36
PCM1-206ENST00000518537 YY1P25490 414 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 NDUFV1P49821 464 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 YWHAZP63104 245 aaKnown RBP17.32■□□□□ 0.36
PCM1-206ENST00000518537 SLC29A2Q14542 456 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 CA9Q16790 459 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 HIBCHQ6NVY1 386 aaPredicted RBP17.32■□□□□ 0.36
PCM1-206ENST00000518537 LRRC8DQ7L1W4 858 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 STRADAQ7RTN6 431 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 URGCPQ8TCY9 931 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 LINC01599Q8WXQ3 324 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 RTP3Q9BQQ7 232 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 ACBD6Q9BR61 282 aa17.32■□□□□ 0.36
PCM1-206ENST00000518537 BCCIPQ9P287 314 aaKnown RBP eCLIP17.32■□□□□ 0.36
PCM1-206ENST00000518537 NDC80O14777 642 aa17.31■□□□□ 0.36
PCM1-206ENST00000518537 RIPK2O43353 540 aa17.31■□□□□ 0.36
PCM1-206ENST00000518537 SELPP16109 830 aa17.31■□□□□ 0.36
PCM1-206ENST00000518537 ATXN1P54253 815 aaKnown RBP17.31■□□□□ 0.36
PCM1-206ENST00000518537 SLC25A52Q3SY17 297 aa17.31■□□□□ 0.36
PCM1-206ENST00000518537 ANKRD20A8PQ5CZ79 823 aa17.31■□□□□ 0.36
PCM1-206ENST00000518537 NPNTQ6UXI9 565 aa17.31■□□□□ 0.36
PCM1-206ENST00000518537 THEM5Q8N1Q8 247 aa17.31■□□□□ 0.36
PCM1-206ENST00000518537 P3H4Q92791 437 aa17.31■□□□□ 0.36
PCM1-206ENST00000518537 MYLPFQ96A32 169 aa17.31■□□□□ 0.36
PCM1-206ENST00000518537 SMARCD1Q96GM5 515 aa17.31■□□□□ 0.36
PCM1-206ENST00000518537 CDC42EP4Q9H3Q1 356 aaKnown RBP17.31■□□□□ 0.36
PCM1-206ENST00000518537 DHX35Q9H5Z1 703 aaKnown RBP17.31■□□□□ 0.36
PCM1-206ENST00000518537 SAGE1Q9NXZ1 904 aa17.31■□□□□ 0.36
PCM1-206ENST00000518537 TPX2Q9ULW0 747 aaKnown RBP17.31■□□□□ 0.36
PCM1-206ENST00000518537 APOL1O14791 398 aa17.3■□□□□ 0.36
PCM1-206ENST00000518537 SHBGP04278 402 aa17.3■□□□□ 0.36
PCM1-206ENST00000518537 NOS2P35228 1153 aa17.3■□□□□ 0.36
PCM1-206ENST00000518537 RABGGTBP53611 331 aa17.3■□□□□ 0.36
PCM1-206ENST00000518537 FAM189BP81408 668 aa17.3■□□□□ 0.36
PCM1-206ENST00000518537 DCAF6Q58WW2 860 aa17.3■□□□□ 0.36
PCM1-206ENST00000518537 DNAJC21Q5F1R6 531 aaKnown RBP17.3■□□□□ 0.36
PCM1-206ENST00000518537 PPP6R3Q5H9R7 873 aaPredicted RBP17.3■□□□□ 0.36
PCM1-206ENST00000518537 NOMO2Q5JPE7 1267 aa17.3■□□□□ 0.36
PCM1-206ENST00000518537 INTS6LQ5JSJ4 861 aaKnown RBP17.3■□□□□ 0.36
PCM1-206ENST00000518537 AGBL2Q5U5Z8 902 aa17.3■□□□□ 0.36
PCM1-206ENST00000518537 CEP128Q6ZU80 1094 aa17.3■□□□□ 0.36
PCM1-206ENST00000518537 HOOK3Q86VS8 718 aa17.3■□□□□ 0.36
PCM1-206ENST00000518537 VSIG1Q86XK7 387 aa17.3■□□□□ 0.36
PCM1-206ENST00000518537 PKNOX2Q96KN3 472 aa17.3■□□□□ 0.36
PCM1-206ENST00000518537 SUSD3Q96L08 255 aa17.3■□□□□ 0.36
PCM1-206ENST00000518537 ZNF670Q9BS34 389 aa17.3■□□□□ 0.36
PCM1-206ENST00000518537 FTHL17Q9BXU8 183 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms