RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 CYP4X1Q8N118 509 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 CERS5Q8N5B7 392 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 TMC2Q8TDI7 906 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 NCLNQ969V3 563 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 CPB2Q96IY4 423 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 L3MBTL3Q96JM7 780 aaPredicted RBP11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 KATNAL1Q9BW62 490 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 AVENQ9NQS1 362 aaPredicted RBP11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 MAP3K20Q9NYL2 800 aaKnown RBP11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 PAK5Q9P286 719 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 LRCH1Q9Y2L9 728 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 GFAPP14136 432 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 BGNP21810 368 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 GARTP22102 1010 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 PCSK1P29120 753 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 HADHBP55084 474 aaKnown RBP11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 PHEXP78562 749 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 CCDC15Q0P6D6 951 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 HIC1Q14526 733 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 KPNB1Q14974 876 aaKnown RBP11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 MGAT5BQ3V5L5 792 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 SZRD1Q7Z422 152 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 PRPF39Q86UA1 669 aaKnown RBP11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 FAM83AQ86UY5 434 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 TRABD2AQ86V40 505 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 MAB21L3Q8N8X9 362 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 TRAPPC12Q8WVT3 735 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 BHMTQ93088 406 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 HAUS8Q9BT25 410 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 CISHQ9NSE2 258 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 DDIT4Q9NX09 232 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 IGKV6D-41A0A0C4DH26 115 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 VWA5AO00534 786 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 MAPTP10636 758 aaKnown RBP11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 ATP6V1C1P21283 382 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 SERPINB3P29508 390 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 CACNA2D1P54289 1103 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 BLMHQ13867 455 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 DNAL1Q4LDG9 190 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 BOLA3Q53S33 107 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 SLC45A4Q5BKX6 768 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 LLGL2Q6P1M3 1020 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 MFSD7Q6UXD7 560 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 ATPAF2Q8N5M1 289 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 IPMKQ8NFU5 416 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 PTPRN2Q92932 1015 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 MKL1Q969V6 931 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 OLFM3Q96PB7 478 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 ZBTB18Q99592 522 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 IDI2Q9BXS1 227 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 TRPC7Q9HCX4 862 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 ORC6Q9Y5N6 252 aa11.23□□□□□ -0.61
PCDHGA1-202ENST00000517417 PFDN1O60925 122 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 STAG3L1P0CL83 205 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 NNMTP40261 264 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 TAF6P49848 677 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 SLC34A1Q06495 639 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 SPIRE1Q08AE8 756 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 STX3Q13277 289 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 C9orf131Q5VYM1 1079 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 LRRC74BQ6ZQY2 392 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 SLC25A41Q8N5S1 370 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 C12orf50Q8NA57 414 aaPredicted RBP11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 ZNF570Q96NI8 536 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 RNF103-CHMP3A0A140T963 221 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 M0QYT0 321 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 EDF1O60869 148 aaKnown RBP11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 ABHD2P08910 425 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 CXCL8P10145 99 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 RANBP1P43487 201 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 CYP1B1Q16678 543 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 IMPG1Q17R60 797 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 SV2CQ496J9 727 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 TFDP3Q5H9I0 405 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 TRIML2Q8N7C3 387 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 EFHBQ8N7U6 833 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 SPATA17Q96L03 361 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 SPATC1LQ9H0A9 340 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 FAM96AQ9H5X1 160 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 SAR1AQ9NR31 198 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 PDP2Q9P2J9 529 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 TRIM49D1C9J1S8 452 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 LIN7AO14910 233 aaPredicted RBP11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 PIAS1O75925 651 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 VIL1P09327 827 aaKnown RBP11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 HOXA10P31260 410 aaPredicted RBP11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 VCPP55072 806 aaKnown RBP11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 OTUD4Q01804 1114 aaKnown RBP11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 RASA2Q15283 850 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 IRGCQ6NXR0 463 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 MTHFD1LQ6UB35 978 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 MPZL3Q6UWV2 235 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 SEMA4DQ92854 862 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 ABI2Q9NYB9 513 aaPredicted RBP11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 FAM198AQ9UFP1 575 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 SHOC2Q9UQ13 582 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 PLIN4Q96Q06 1357 aa11.22□□□□□ -0.61
PCDHGA1-202ENST00000517417 LOC100653049A0A140TA62 436 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 RRN3P2A6NIE6 340 aa11.21□□□□□ -0.61
PCDHGA1-202ENST00000517417 DPYSL4O14531 572 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms