RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 LRRC24Q50LG9 513 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 SGO2Q562F6 1265 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 LCE2DQ5TA82 110 aaPredicted RBP4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 LIPMQ5VYY2 423 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 KRT80Q6KB66 452 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 TTI2Q6NXR4 508 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 KLHL35Q6PF15 583 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 TRAT1Q6PIZ9 186 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 SEZ6L2Q6UXD5 910 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 CHST3Q7LGC8 479 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 TMPRSS7Q7RTY8 843 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 ZER1Q7Z7L7 766 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 DNAAF5Q86Y56 855 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 LURAP1LQ8IV03 231 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 LINC00346Q8IVM7 164 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 RHOT2Q8IXI1 618 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 CCDC105Q8IYK2 499 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 ADGRF2Q8IZF7 708 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 FAM71DQ8N9W8 422 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 POC5Q8NA72 575 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 SETD6Q8TBK2 473 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 SNX33Q8WV41 574 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 ZFAND2BQ8WV99 257 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 UBE2FQ969M7 185 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 PERPQ96FX8 193 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 CCDC114Q96M63 670 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 MED15Q96RN5 788 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 JMJD8Q96S16 334 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 ATP6V0BQ99437 205 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 INTS2Q9H0H0 1204 aaKnown RBP4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 AP5M1Q9H0R1 490 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 C1orf21Q9H246 121 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 BCO1Q9HAY6 547 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 SLC39A2Q9NP94 309 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 MID1IP1Q9NPA3 183 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 LTB4R2Q9NPC1 389 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 FANCFQ9NPI8 374 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 LANCL2Q9NS86 450 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 TMEM140Q9NV12 185 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 SIDT1Q9NXL6 827 aaKnown RBP4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 EHD2Q9NZN4 543 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 SUCLA2Q9P2R7 463 aaPredicted RBP4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 ZNF70Q9UC06 446 aaPredicted RBP4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 DUSP13Q9UII6 198 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 CAPN11Q9UMQ6 739 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 SMC3Q9UQE7 1217 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 SIT1Q9Y3P8 196 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 ACTL7AQ9Y615 435 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 POMT1Q9Y6A1 747 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 EPN1Q9Y6I3 576 aaPredicted RBP4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 AP1M2Q9Y6Q5 423 aa4.23□□□□□ -1.73
RNU4-60P-201ENST00000517239 TRAV34A0A0B4J273 112 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 LOC102723971A0A1B0GUV8 181 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 FAM237BA0A1B0GVD1 139 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 CCDC151A5D8V7 595 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 SAC3D1A6NKF1 404 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 TMEM110-MUSTN1A8MSY1 372 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 KIF28PB7ZC32 967 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 TMEM232C9JQI7 657 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 ZSCAN9O15535 394 aaPredicted RBP4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 SGSM2O43147 1006 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 CCNT2O60583 730 aaKnown RBP4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 SMPD2O60906 423 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 PSMD10O75832 226 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 DNAJB5O75953 348 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 CAMTA2O94983 1202 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 REC8O95072 547 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 CSPG5O95196 566 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 SNX4O95219 450 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 GNAI2P04899 355 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 CYP21A2P08686 494 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 SNRPA1P09661 255 aaKnown RBP4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 WEE2P0C1S8 567 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 CCDC175P0C221 793 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 SBK3P0C264 359 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 MYBL1P10243 752 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 CYP2A6P11509 494 aaPredicted RBP4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 TNNT1P13805 278 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 SELLP14151 372 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 NID1P14543 1247 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 PTPN2P17706 415 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 FUT4P22083 530 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 CPT2P23786 658 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 MCM3P25205 808 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 MST1P26927 711 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 PCSK1P29120 753 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 ICAM3P32942 547 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 BSGP35613 385 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 CPA2P48052 419 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 PTDSS1P48651 473 aaKnown RBP4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 TKTL1P51854 596 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 ANTXR2P58335 489 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 IFT88Q13099 833 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 MTM1Q13496 603 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 NPY5RQ15761 445 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 NTRK2Q16620 822 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 AMOTQ4VCS5 1084 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 ZNF628Q5EBL2 1059 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 C9orf152Q5JTZ5 239 aa4.22□□□□□ -1.73
RNU4-60P-201ENST00000517239 KRBOX4Q5JUW0 171 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms