RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 MLXIPLQ9NP71 852 aa0.93□□□□□ -2.26
SCARNA23-201ENST00000516060 TDP1Q9NUW8 608 aa0.93□□□□□ -2.26
SCARNA23-201ENST00000516060 RLIMQ9NVW2 624 aa0.93□□□□□ -2.26
SCARNA23-201ENST00000516060 SNTG2Q9NY99 539 aa0.93□□□□□ -2.26
SCARNA23-201ENST00000516060 LPAR3Q9UBY5 353 aa0.93□□□□□ -2.26
SCARNA23-201ENST00000516060 NFS1Q9Y697 457 aa0.93□□□□□ -2.26
SCARNA23-201ENST00000516060 SIRT4Q9Y6E7 314 aaPredicted RBP0.93□□□□□ -2.26
SCARNA23-201ENST00000516060 F8W810 466 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 CES2O00748 559 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 PPP1R12AO14974 1030 aaPredicted RBP0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 ASAP2O43150 1006 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 KCNQ3O43525 872 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 LMX1BO60663 402 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 RFPL3O75679 317 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 ARIH2O95376 493 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 VNN1O95497 513 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 PLAUP00749 431 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 RNF224P0DH78 156 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 ANOS1P23352 680 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 LOXL3P58215 753 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 RBM6P78332 1123 aaKnown RBP0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 SRSF2Q01130 221 aaKnown RBP0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 ROR2Q01974 943 aaKnown RBP0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 TLE1Q04724 770 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 PABPC4Q13310 644 aaKnown RBP eCLIP0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 SERINC3Q13530 473 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 KCNJ12Q14500 433 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 LY6KQ17RY6 165 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 FAM110CQ1W6H9 321 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 STPG1Q5TH74 334 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 PP632Q6XCG6 107 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 H1FNTQ75WM6 255 aaPredicted RBP0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 SMIM29Q86T20 159 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 CMIPQ8IY22 773 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 CLRN3Q8NCR9 226 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 LMBR1Q8WVP7 490 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 LPAR1Q92633 364 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 MRGPRX4Q96LA9 322 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 SLC46A1Q96NT5 459 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 DUX5Q96PT3 197 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 DUX3Q96PT4 197 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 ACO2Q99798 780 aaKnown RBP0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 TRMT61BQ9BVS5 477 aaKnown RBP0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 DCLK3Q9C098 648 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 ABHD16BQ9H3Z7 469 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 CFAP97Q9P2B7 532 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 PRO0461Q9UI25 63 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 INTUQ9ULD6 942 aa0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 NDRG4Q9ULP0 352 aaKnown RBP0.92□□□□□ -2.26
SCARNA23-201ENST00000516060 ADAMTS9Q9P2N4 1935 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 INAFM1C9JVW0 142 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 EDIL3O43854 480 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 CSF1RP07333 972 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 FCGR1AP12314 374 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 GKP32189 559 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 PXNP49023 591 aaPredicted RBP0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 DIO1P49895 249 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 SLC5A3P53794 718 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 LILRA4P59901 499 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 SEC61A1P61619 476 aaKnown RBP0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 DMP1Q13316 513 aaPredicted RBP0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 E2F2Q14209 437 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 RAB39AQ14964 217 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 ATP13A4Q4VNC1 1196 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 XKR6Q5GH73 641 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 DEPDC1Q5TB30 811 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 DCAF12L1Q5VU92 463 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 LAYNQ6UX15 382 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 CREB3L2Q70SY1 520 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 USP37Q86T82 979 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 LMNTD1Q8N9Z9 388 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 NRG4Q8WWG1 115 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 INPP5DQ92835 1189 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 RSPRY1Q96DX4 576 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 HS6ST2Q96MM7 605 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 DMRTA2Q96SC8 542 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 TTYH3Q9C0H2 523 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 PAPOLBQ9NRJ5 636 aaKnown RBP0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 IGSF5Q9NSI5 407 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 TMEM248Q9NWD8 314 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 SIDT1Q9NXL6 827 aaKnown RBP0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 POU2F3Q9UKI9 436 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 AGO2Q9UKV8 859 aaKnown RBP0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 ADAM18Q9Y3Q7 739 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 PCDHA13Q9Y5I0 950 aa0.91□□□□□ -2.26
SCARNA23-201ENST00000516060 CKAP5Q14008 2032 aa0.9□□□□□ -2.27
SCARNA23-201ENST00000516060 A0A1B0GVT2 93 aa0.9□□□□□ -2.27
SCARNA23-201ENST00000516060 SLC22A23A1A5C7 686 aa0.9□□□□□ -2.27
SCARNA23-201ENST00000516060 OR6C75A6NL08 312 aa0.9□□□□□ -2.27
SCARNA23-201ENST00000516060 GOLGA8AA7E2F4 631 aa0.9□□□□□ -2.27
SCARNA23-201ENST00000516060 CLIC1O00299 241 aa0.9□□□□□ -2.27
SCARNA23-201ENST00000516060 RRHO14718 337 aa0.9□□□□□ -2.27
SCARNA23-201ENST00000516060 PMPCBO75439 489 aa0.9□□□□□ -2.27
SCARNA23-201ENST00000516060 GNAI3P08754 354 aa0.9□□□□□ -2.27
SCARNA23-201ENST00000516060 ATXN1LP0C7T5 689 aaKnown RBP0.9□□□□□ -2.27
SCARNA23-201ENST00000516060 DNAH10OSP0CZ25 163 aa0.9□□□□□ -2.27
SCARNA23-201ENST00000516060 RARBP10826 455 aa0.9□□□□□ -2.27
SCARNA23-201ENST00000516060 CPA1P15085 419 aa0.9□□□□□ -2.27
SCARNA23-201ENST00000516060 MYF6P23409 242 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms