RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 CYP1B1Q16678 543 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 ZNF750Q32MQ0 723 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 C3orf38Q5JPI3 329 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 DEPDC1Q5TB30 811 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 AWAT2Q6E213 333 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 PPP4R4Q6NUP7 873 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 ZDHHC24Q6UX98 284 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 SLC29A4Q7RTT9 530 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 SPARTQ8N0X7 666 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 SDR16C5Q8N3Y7 309 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 FANCBQ8NB91 859 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 ZDHHC12Q96GR4 267 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 VN1R3Q9BXE9 311 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 ZCWPW1Q9H0M4 648 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 ZNF700Q9H0M5 742 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 CHST8Q9H2A9 424 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 DKK4Q9UBT3 224 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 ADAMTS5Q9UNA0 930 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 COMMD10Q9Y6G5 202 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 CUX2O14529 1486 aa3.9□□□□□ -1.79
HERC4-215ENST00000515753 KCNU1A8MYU2 1149 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 QSOX1O00391 747 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 PPEF2O14830 753 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 MT-ND5P03915 603 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 ANXA2P07355 339 aaKnown RBP3.89□□□□□ -1.79
HERC4-215ENST00000515753 IL1R2P27930 398 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 CYP2C18P33260 490 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 ARHGAP25P42331 645 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 PTDSS1P48651 473 aaKnown RBP3.89□□□□□ -1.79
HERC4-215ENST00000515753 CARSP49589 748 aaKnown RBP3.89□□□□□ -1.79
HERC4-215ENST00000515753 KRTAP10-6P60371 365 aaPredicted RBP3.89□□□□□ -1.79
HERC4-215ENST00000515753 DAG1Q14118 895 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 SLC29A2Q14542 456 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 MAP9Q49MG5 647 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 RUSC1-AS1Q66K80 236 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 MZT2AQ6P582 158 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 C11orf96Q7Z7L8 435 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 RAB11FIP4Q86YS3 637 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 LRRC71Q8N4P6 559 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 SAMD3Q8N6K7 520 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 DNAJB14Q8TBM8 379 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 SMCR8Q8TEV9 937 aaPredicted RBP3.89□□□□□ -1.79
HERC4-215ENST00000515753 R3HDM4Q96D70 268 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 SNX22Q96L94 193 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 PNPLA8Q9NP80 782 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 MID2Q9UJV3 735 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 PCDHGB6Q9Y5F9 930 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 NCAPD3P42695 1498 aa3.89□□□□□ -1.79
HERC4-215ENST00000515753 ANO9A1A5B4 782 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 PRRT4C9JH25 899 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 H7C4K7 107 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 CREB3O43889 395 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 SRGAP2O75044 1071 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 RASSF9O75901 435 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 IL18RAPO95256 599 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 A1BGP04217 495 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 MYCLP12524 364 aaPredicted RBP3.88□□□□□ -1.79
HERC4-215ENST00000515753 SLC5A1P13866 664 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 UQCRC1P31930 480 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 GKP32189 559 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 MMP13P45452 471 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 CASP5P51878 434 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 TIRAPP58753 221 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 CLCA4Q14CN2 919 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 RABEP1Q15276 862 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 PTCHD3Q3KNS1 767 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 TBC1D25Q3MII6 688 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 ZNF260Q3ZCT1 412 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 KLHL22Q53GT1 634 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 TMEM63BQ5T3F8 832 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 CRELD2Q6UXH1 353 aaPredicted RBP3.88□□□□□ -1.79
HERC4-215ENST00000515753 CAND1Q86VP6 1230 aaKnown RBP3.88□□□□□ -1.79
HERC4-215ENST00000515753 CNGA4Q8IV77 575 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 SFTPA1Q8IWL2 248 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 ABHD11Q8NFV4 315 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 PPP2R3CQ969Q6 453 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 C17orf80Q9BSJ5 609 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 SELENOOQ9BVL4 669 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 STK31Q9BXU1 1019 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 ARNT2Q9HBZ2 717 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 GBA2Q9HCG7 927 aaPredicted RBP3.88□□□□□ -1.79
HERC4-215ENST00000515753 GAR1Q9NY12 217 aaKnown RBP3.88□□□□□ -1.79
HERC4-215ENST00000515753 VPS51Q9UID3 782 aa3.88□□□□□ -1.79
HERC4-215ENST00000515753 ERCC6Q03468 1493 aa3.87□□□□□ -1.79
HERC4-215ENST00000515753 RHPN2P1A8MT19 583 aa3.87□□□□□ -1.79
HERC4-215ENST00000515753 A8MVJ9 347 aa3.87□□□□□ -1.79
HERC4-215ENST00000515753 F8W8V4 182 aa3.87□□□□□ -1.79
HERC4-215ENST00000515753 PIAS2O75928 621 aa3.87□□□□□ -1.79
HERC4-215ENST00000515753 TSHRP16473 764 aa3.87□□□□□ -1.79
HERC4-215ENST00000515753 ZKSCAN1P17029 563 aaPredicted RBP3.87□□□□□ -1.79
HERC4-215ENST00000515753 ENGP17813 658 aa3.87□□□□□ -1.79
HERC4-215ENST00000515753 BTF3P20290 206 aaKnown RBP3.87□□□□□ -1.79
HERC4-215ENST00000515753 PRKAR1BP31321 381 aa3.87□□□□□ -1.79
HERC4-215ENST00000515753 TM4SF4P48230 202 aa3.87□□□□□ -1.79
HERC4-215ENST00000515753 FOXG1P55316 489 aaPredicted RBP3.87□□□□□ -1.79
HERC4-215ENST00000515753 SUMO2P61956 95 aaKnown RBP3.87□□□□□ -1.79
HERC4-215ENST00000515753 CYP4F2P78329 520 aa3.87□□□□□ -1.79
HERC4-215ENST00000515753 ZNF543Q08ER8 600 aa3.87□□□□□ -1.79
HERC4-215ENST00000515753 BRD3Q15059 726 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms