RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 NDRG2Q9UN36 371 aaKnown RBP13.47□□□□□ -0.25
CLCN3-210ENST00000515420 PCDHB4Q9Y5E5 795 aa13.47□□□□□ -0.25
CLCN3-210ENST00000515420 H0Y858 1186 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 TRDMT1O14717 391 aaKnown RBP13.46□□□□□ -0.25
CLCN3-210ENST00000515420 CYP26A1O43174 497 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 TLR5O60602 858 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 CHRNB1P11230 501 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 EEF1GP26641 437 aaKnown RBP13.46□□□□□ -0.25
CLCN3-210ENST00000515420 PLA2G4AP47712 749 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 SOX9P48436 509 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 MFAP3P55082 362 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 CNGA2Q16280 664 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 ZNF528Q3MIS6 628 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 PKDCCQ504Y2 493 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 CCDC183Q5T5S1 534 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 TRIM68Q6AZZ1 485 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 TXNDC11Q6PKC3 985 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 PIGZQ86VD9 579 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 ARHGAP18Q8N392 663 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 RBBP8NLQ8NC74 664 aaPredicted RBP13.46□□□□□ -0.25
CLCN3-210ENST00000515420 ENOX1Q8TC92 643 aaKnown RBP13.46□□□□□ -0.25
CLCN3-210ENST00000515420 KCTD13Q8WZ19 329 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 KAT5Q92993 513 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 CCSER2Q9H7U1 834 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.46□□□□□ -0.25
CLCN3-210ENST00000515420 APEX2Q9UBZ4 518 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 FBXO4Q9UKT5 387 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.46□□□□□ -0.25
CLCN3-210ENST00000515420 WNT6Q9Y6F9 365 aa13.46□□□□□ -0.25
CLCN3-210ENST00000515420 PIEZO1Q92508 2521 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 OTOL1A6NHN0 477 aaPredicted RBP13.45□□□□□ -0.26
CLCN3-210ENST00000515420 LAMTOR5O43504 91 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 RALAP11233 206 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 ARSAP15289 507 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 ATP5C1P36542 298 aaKnown RBP13.45□□□□□ -0.26
CLCN3-210ENST00000515420 NBL1P41271 181 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 PDE4CQ08493 712 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 GOLGA8FQ08AF8 430 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 GOLGA8DPQ0D2H9 430 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 CCINQ13939 588 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 TMEM196Q5HYL7 178 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 PM20D1Q6GTS8 502 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 SASS6Q6UVJ0 657 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 RRAGAQ7L523 313 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 CREBRFQ8IUR6 639 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 ATOH1Q92858 354 aaPredicted RBP13.45□□□□□ -0.26
CLCN3-210ENST00000515420 KREMEN1Q96MU8 473 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 TUBGCP2Q9BSJ2 902 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 NACA2Q9H009 215 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 NDST4Q9H3R1 872 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 UBE2TQ9NPD8 197 aaPredicted RBP13.45□□□□□ -0.26
CLCN3-210ENST00000515420 ANO10Q9NW15 660 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 SMPD4Q9NXE4 827 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 CFAP97Q9P2B7 532 aa13.45□□□□□ -0.26
CLCN3-210ENST00000515420 A0A1W2PQH9 124 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 KCNJ18B7U540 433 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 PROB1E7EW31 1015 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 RNF225M0QZC1 329 aaPredicted RBP13.44□□□□□ -0.26
CLCN3-210ENST00000515420 ZBED1O96006 694 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 PON1P27169 355 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 GJA4P35212 333 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 TKTL1P51854 596 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 GRSF1Q12849 480 aaKnown RBP eCLIP13.44□□□□□ -0.26
CLCN3-210ENST00000515420 KCNJ12Q14500 433 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 PPP2R5DQ14738 602 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 PON2Q15165 354 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 STX1AQ16623 288 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 VWA3BQ502W6 1294 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 MIIPQ5JXC2 388 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 SLC35F5Q8WV83 523 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 TFAP2BQ92481 460 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 CHFRQ96EP1 664 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 CRACR2AQ9BSW2 395 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 LMAN1LQ9HAT1 526 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 NMUR1Q9HB89 426 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 LRRC4Q9HBW1 653 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 CNGB3Q9NQW8 809 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 PRMT8Q9NR22 394 aaPredicted RBP13.44□□□□□ -0.26
CLCN3-210ENST00000515420 SPATA6Q9NWH7 488 aaPredicted RBP13.44□□□□□ -0.26
CLCN3-210ENST00000515420 OSER1Q9NX31 292 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 DNMT3LQ9UJW3 386 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 NAGPAQ9UK23 515 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 SH3BP1Q9Y3L3 701 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 NFE2L3Q9Y4A8 694 aa13.44□□□□□ -0.26
CLCN3-210ENST00000515420 MED7O43513 233 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 PAPSS2O95340 614 aaPredicted RBP13.43□□□□□ -0.26
CLCN3-210ENST00000515420 ADH1CP00326 375 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 RARGP13631 454 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 SLC9A1P19634 815 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 DRD1P21728 446 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 EIF2DP41214 584 aaKnown RBP13.43□□□□□ -0.26
CLCN3-210ENST00000515420 PGFP49763 221 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 CCR3P51677 355 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 MTAPQ13126 283 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 FBXO43Q4G163 708 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 TCP11X2Q5H9J9 407 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 CDKAL1Q5VV42 579 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 ZC3H14Q6PJT7 736 aaKnown RBP13.43□□□□□ -0.26
CLCN3-210ENST00000515420 HTR3DQ70Z44 454 aa13.43□□□□□ -0.26
CLCN3-210ENST00000515420 SCD5Q86SK9 330 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms