RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 CCDC68Q9H2F9 335 aa13.29□□□□□ -0.28
SMAD1-215ENST00000515385 DDX56Q9NY93 547 aaKnown RBP13.29□□□□□ -0.28
SMAD1-215ENST00000515385 HERC5Q9UII4 1024 aaKnown RBP13.29□□□□□ -0.28
SMAD1-215ENST00000515385 PCDHA1Q9Y5I3 950 aa13.29□□□□□ -0.28
SMAD1-215ENST00000515385 GOLGA8SH3BPF8 625 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 GOLGA8MH3BSY2 632 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 MEIS2O14770 477 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 BANF1O75531 89 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 FBXO21O94952 628 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 KRT1P04264 644 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 EIF2S1P05198 315 aaKnown RBP13.28□□□□□ -0.28
SMAD1-215ENST00000515385 BPGMP07738 259 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 OCM2P0CE71 109 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 OCMP0CE72 109 aaPredicted RBP13.28□□□□□ -0.28
SMAD1-215ENST00000515385 ITGAXP20702 1163 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 S100A1P23297 94 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 ENTPD1P49961 510 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 RPS8P62241 208 aaKnown RBP13.28□□□□□ -0.28
SMAD1-215ENST00000515385 BBS9Q3SYG4 887 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 MSS51Q4VC12 460 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 KAZNQ674X7 775 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 SPOCD1Q6ZMY3 1216 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 MON1BQ7L1V2 547 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 NANOGNBQ7Z5D8 188 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 POU5F2Q8N7G0 328 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 DDHD1Q8NEL9 900 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 SLC35B2Q8TB61 432 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 DLG3Q92796 817 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 CCDC124Q96CT7 223 aaKnown RBP13.28□□□□□ -0.28
SMAD1-215ENST00000515385 CGREF1Q99674 301 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 TMEM8AQ9HCN3 771 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 XAB2Q9HCS7 855 aaKnown RBP13.28□□□□□ -0.28
SMAD1-215ENST00000515385 DNAJC28Q9NX36 388 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 QPCTLQ9NXS2 382 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 KIAA1522Q9P206 1035 aaPredicted RBP13.28□□□□□ -0.28
SMAD1-215ENST00000515385 HESX1Q9UBX0 185 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 STK39Q9UEW8 545 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 CDH7Q9ULB5 785 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 PCDHB2Q9Y5E7 798 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 MYPNQ86TC9 1320 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 ZC3H11AO75152 810 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMAD1-215ENST00000515385 BMP10O95393 424 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 IFNB1P01574 187 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 CYP3A4P08684 503 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 KITP10721 976 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 ATF7P17544 494 aaPredicted RBP13.28□□□□□ -0.28
SMAD1-215ENST00000515385 ATF3P18847 181 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 BTDP43251 543 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 STAT2P52630 851 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 GCNT1Q02742 428 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 PUS10Q3MIT2 529 aaKnown RBP13.28□□□□□ -0.28
SMAD1-215ENST00000515385 FSCBQ5H9T9 825 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 STXBP5Q5T5C0 1151 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 WDR78Q5VTH9 848 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 PLA2G4FQ68DD2 849 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 PLEKHA7Q6IQ23 1121 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 NIPAL1Q6NVV3 410 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 INTS5Q6P9B9 1019 aaKnown RBP13.28□□□□□ -0.28
SMAD1-215ENST00000515385 SAPCD2Q86UD0 394 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 HPS6Q86YV9 775 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 TPH2Q8IWU9 490 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 HIPK4Q8NE63 616 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 PIWIL2Q8TC59 973 aaKnown RBP13.28□□□□□ -0.28
SMAD1-215ENST00000515385 HM13Q8TCT9 377 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 NLRP7Q8WX94 980 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 CASP10Q92851 521 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 CELF1Q92879 486 aaKnown RBP13.28□□□□□ -0.28
SMAD1-215ENST00000515385 TRIM56Q9BRZ2 755 aaKnown RBP13.28□□□□□ -0.28
SMAD1-215ENST00000515385 RTKNQ9BST9 563 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 PCIF1Q9H4Z3 704 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 HSPBP1Q9NZL4 362 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 SELENONQ9NZV5 590 aa13.28□□□□□ -0.28
SMAD1-215ENST00000515385 TRIM49D1C9J1S8 452 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 K7ENM7 598 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 EIF3FO00303 357 aaPredicted RBP13.27□□□□□ -0.28
SMAD1-215ENST00000515385 SIN3BO75182 1162 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 H6PDO95479 791 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 PDGFRBP09619 1106 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 WEE2P0C1S8 567 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 KRT10P13645 584 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 KRT5P13647 590 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 ESRRGP62508 458 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 TXNL4AP83876 142 aaKnown RBP13.27□□□□□ -0.28
SMAD1-215ENST00000515385 MAMLD1Q13495 774 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 QRICH1Q2TAL8 776 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 TFDP3Q5H9I0 405 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 TTBK2Q6IQ55 1244 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 MFSD7Q6UXD7 560 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 DCDC5Q6ZRR9 648 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 DENND5BQ6ZUT9 1274 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 AMIGO2Q86SJ2 522 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 TERB1Q8NA31 727 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 SENP7Q9BQF6 1050 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 EBF4Q9BQW3 602 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 WDR83Q9BRX9 315 aaKnown RBP13.27□□□□□ -0.28
SMAD1-215ENST00000515385 RIMS3Q9UJD0 308 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 VPS28Q9UK41 221 aa13.27□□□□□ -0.28
SMAD1-215ENST00000515385 GPC6Q9Y625 555 aaPredicted RBP13.27□□□□□ -0.28
SMAD1-215ENST00000515385 MYH11P35749 1972 aa13.27□□□□□ -0.29
SMAD1-215ENST00000515385 hCG_1818297A0A087WSY0 165 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms