RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 TLR8Q9NR97 1041 aaKnown RBP22.03■■□□□ 1.12
LSM6-207ENST00000515311 ASNSD1Q9NWL6 643 aa22.03■■□□□ 1.12
LSM6-207ENST00000515311 HCFC1R1Q9NWW0 138 aa22.03■■□□□ 1.12
LSM6-207ENST00000515311 ANAPC1Q9H1A4 1944 aa22.03■■□□□ 1.12
LSM6-207ENST00000515311 BRWD1Q9NSI6 2320 aa22.03■■□□□ 1.12
LSM6-207ENST00000515311 RHOP08100 348 aa22.02■■□□□ 1.12
LSM6-207ENST00000515311 ZDHHC11BP0C7U3 371 aa22.02■■□□□ 1.12
LSM6-207ENST00000515311 RRM1P23921 792 aa22.02■■□□□ 1.12
LSM6-207ENST00000515311 CDC25CP30307 473 aa22.02■■□□□ 1.12
LSM6-207ENST00000515311 KRT83P78385 493 aa22.02■■□□□ 1.12
LSM6-207ENST00000515311 CCDC85BQ15834 202 aaPredicted RBP22.02■■□□□ 1.12
LSM6-207ENST00000515311 CES5AQ6NT32 575 aa22.02■■□□□ 1.12
LSM6-207ENST00000515311 EP400NLQ6ZTU2 488 aa22.02■■□□□ 1.12
LSM6-207ENST00000515311 GRASPQ7Z6J2 395 aaPredicted RBP22.02■■□□□ 1.12
LSM6-207ENST00000515311 DNAAF5Q86Y56 855 aa22.02■■□□□ 1.12
LSM6-207ENST00000515311 HS6ST3Q8IZP7 471 aa22.02■■□□□ 1.12
LSM6-207ENST00000515311 CLEC4CQ8WTT0 213 aa22.02■■□□□ 1.12
LSM6-207ENST00000515311 CTNNBL1Q8WYA6 563 aaPredicted RBP22.02■■□□□ 1.12
LSM6-207ENST00000515311 ZNF653Q96CK0 615 aa22.02■■□□□ 1.12
LSM6-207ENST00000515311 GMIPQ9P107 970 aa22.02■■□□□ 1.12
LSM6-207ENST00000515311 PCDHA13Q9Y5I0 950 aa22.02■■□□□ 1.12
LSM6-207ENST00000515311 DOCK6Q96HP0 2047 aa22.02■■□□□ 1.12
LSM6-207ENST00000515311 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.01■■□□□ 1.11
LSM6-207ENST00000515311 TCRBV5S1A1TA0A578 114 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 YJEFN3A6XGL0 299 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 E7ENQ6 273 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 HSF2BPO75031 334 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 F11P03951 625 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 TMEM253P0C7T8 217 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 ABCB4P21439 1286 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 MAGEA1P43355 309 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 GPC5P78333 572 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 FAM102AQ5T9C2 384 aaPredicted RBP22.01■■□□□ 1.11
LSM6-207ENST00000515311 PLEKHA7Q6IQ23 1121 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 PDZD4Q76G19 769 aaPredicted RBP22.01■■□□□ 1.11
LSM6-207ENST00000515311 BEND5Q7L4P6 421 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 ARCQ7LC44 396 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 SCD5Q86SK9 330 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 TMEM150AQ86TG1 271 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 SMRP1Q8NCR6 262 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 GOLGA1Q92805 767 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 PIWIL1Q96J94 861 aaKnown RBP22.01■■□□□ 1.11
LSM6-207ENST00000515311 GCNAQ96QF7 691 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 THAP2Q9H0W7 228 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 UBE2ZQ9H832 354 aaPredicted RBP22.01■■□□□ 1.11
LSM6-207ENST00000515311 PARVAQ9NVD7 372 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 CLIC5Q9NZA1 410 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 TRPM5Q9NZQ8 1165 aa22.01■■□□□ 1.11
LSM6-207ENST00000515311 CNOT8Q9UFF9 292 aaKnown RBP22.01■■□□□ 1.11
LSM6-207ENST00000515311 REXO2Q9Y3B8 237 aaKnown RBP22.01■■□□□ 1.11
LSM6-207ENST00000515311 DENND4AQ7Z401 1863 aa22■■□□□ 1.11
LSM6-207ENST00000515311 ZNF840PA6NDX5 716 aa22■■□□□ 1.11
LSM6-207ENST00000515311 ZNF197O14709 1029 aa22■■□□□ 1.11
LSM6-207ENST00000515311 TADA3O75528 432 aa22■■□□□ 1.11
LSM6-207ENST00000515311 LTFP02788 710 aa22■■□□□ 1.11
LSM6-207ENST00000515311 CYP1A2P05177 515 aa22■■□□□ 1.11
LSM6-207ENST00000515311 MYL4P12829 197 aa22■■□□□ 1.11
LSM6-207ENST00000515311 GABRR2P28476 465 aa22■■□□□ 1.11
LSM6-207ENST00000515311 YWHAGP61981 247 aaKnown RBP eCLIP22■■□□□ 1.11
LSM6-207ENST00000515311 YWHAZP63104 245 aaKnown RBP22■■□□□ 1.11
LSM6-207ENST00000515311 DNAJC24Q6P3W2 148 aa22■■□□□ 1.11
LSM6-207ENST00000515311 GAREM2Q75VX8 874 aa22■■□□□ 1.11
LSM6-207ENST00000515311 TXLNBQ8N3L3 684 aa22■■□□□ 1.11
LSM6-207ENST00000515311 ZNF276Q8N554 614 aa22■■□□□ 1.11
LSM6-207ENST00000515311 FEZF2Q8TBJ5 459 aa22■■□□□ 1.11
LSM6-207ENST00000515311 NDRG1Q92597 394 aaKnown RBP22■■□□□ 1.11
LSM6-207ENST00000515311 RIPOR3Q96MK2 946 aa22■■□□□ 1.11
LSM6-207ENST00000515311 APOL5Q9BWW9 433 aa22■■□□□ 1.11
LSM6-207ENST00000515311 PACSIN1Q9BY11 444 aa22■■□□□ 1.11
LSM6-207ENST00000515311 CHORDC1Q9UHD1 332 aaPredicted RBP22■■□□□ 1.11
LSM6-207ENST00000515311 CD207Q9UJ71 328 aa22■■□□□ 1.11
LSM6-207ENST00000515311 SCINQ9Y6U3 715 aa22■■□□□ 1.11
LSM6-207ENST00000515311 A0A1W2PQH9 124 aa21.99■■□□□ 1.11
LSM6-207ENST00000515311 SIGLEC16A6NMB1 481 aa21.99■■□□□ 1.11
LSM6-207ENST00000515311 GOLGA8SH3BPF8 625 aa21.99■■□□□ 1.11
LSM6-207ENST00000515311 TUBP50607 506 aa21.99■■□□□ 1.11
LSM6-207ENST00000515311 MAMLD1Q13495 774 aa21.99■■□□□ 1.11
LSM6-207ENST00000515311 SKIV2LQ15477 1246 aaKnown RBP21.99■■□□□ 1.11
LSM6-207ENST00000515311 PRSS36Q5K4E3 855 aa21.99■■□□□ 1.11
LSM6-207ENST00000515311 ATAT1Q5SQI0 421 aa21.99■■□□□ 1.11
LSM6-207ENST00000515311 PPP1R15BQ5SWA1 713 aa21.99■■□□□ 1.11
LSM6-207ENST00000515311 BSPRYQ5W0U4 402 aa21.99■■□□□ 1.11
LSM6-207ENST00000515311 ACRBPQ8NEB7 543 aa21.99■■□□□ 1.11
LSM6-207ENST00000515311 KHSRPQ92945 711 aaKnown RBP eCLIP21.99■■□□□ 1.11
LSM6-207ENST00000515311 ZNF830Q96NB3 372 aaPredicted RBP21.99■■□□□ 1.11
LSM6-207ENST00000515311 DESI2Q9BSY9 194 aa21.99■■□□□ 1.11
LSM6-207ENST00000515311 NMUR1Q9HB89 426 aa21.99■■□□□ 1.11
LSM6-207ENST00000515311 POPDC2Q9HBU9 364 aa21.99■■□□□ 1.11
LSM6-207ENST00000515311 MRPL47Q9HD33 250 aaKnown RBP21.99■■□□□ 1.11
LSM6-207ENST00000515311 WDR6Q9NNW5 1121 aaKnown RBP21.99■■□□□ 1.11
LSM6-207ENST00000515311 ABCC13Q9NSE7 274 aa21.99■■□□□ 1.11
LSM6-207ENST00000515311 TMEM59LQ9UK28 342 aa21.99■■□□□ 1.11
LSM6-207ENST00000515311 ADGRG1Q9Y653 693 aa21.99■■□□□ 1.11
LSM6-207ENST00000515311 SOBPA7XYQ1 873 aa21.98■■□□□ 1.11
LSM6-207ENST00000515311 ATMINO43313 823 aaPredicted RBP21.98■■□□□ 1.11
LSM6-207ENST00000515311 KRT3P12035 628 aa21.98■■□□□ 1.11
LSM6-207ENST00000515311 CCR2P41597 374 aa21.98■■□□□ 1.11
LSM6-207ENST00000515311 MTHFRP42898 656 aa21.98■■□□□ 1.11
LSM6-207ENST00000515311 PGFP49763 221 aa21.98■■□□□ 1.11
LSM6-207ENST00000515311 VAV2P52735 878 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms