RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 SUV39H1O43463 412 aa12.65□□□□□ -0.38
SMAD5-210ENST00000515005 TRAK2O60296 914 aa12.65□□□□□ -0.38
SMAD5-210ENST00000515005 PFKLP17858 780 aa12.65□□□□□ -0.38
SMAD5-210ENST00000515005 RPA1P27694 616 aa12.65□□□□□ -0.38
SMAD5-210ENST00000515005 MATR3P43243 847 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMAD5-210ENST00000515005 AAMPQ13685 434 aa12.65□□□□□ -0.38
SMAD5-210ENST00000515005 PDIA5Q14554 519 aa12.65□□□□□ -0.38
SMAD5-210ENST00000515005 ANO4Q32M45 955 aa12.65□□□□□ -0.38
SMAD5-210ENST00000515005 FUT11Q495W5 492 aa12.65□□□□□ -0.38
SMAD5-210ENST00000515005 FBXL16Q8N461 479 aa12.65□□□□□ -0.38
SMAD5-210ENST00000515005 JAKMIP1Q96N16 626 aaKnown RBP12.65□□□□□ -0.38
SMAD5-210ENST00000515005 TMEM60Q9H2L4 133 aa12.65□□□□□ -0.38
SMAD5-210ENST00000515005 TM9SF3Q9HD45 589 aa12.65□□□□□ -0.38
SMAD5-210ENST00000515005 TBC1D14Q9P2M4 693 aa12.65□□□□□ -0.38
SMAD5-210ENST00000515005 CLCA2Q9UQC9 943 aa12.65□□□□□ -0.38
SMAD5-210ENST00000515005 RBM19Q9Y4C8 960 aaKnown RBP12.65□□□□□ -0.38
SMAD5-210ENST00000515005 PCDHB6Q9Y5E3 794 aa12.65□□□□□ -0.38
SMAD5-210ENST00000515005 MYH10P35580 1976 aa12.65□□□□□ -0.38
SMAD5-210ENST00000515005 ITPR3Q14573 2671 aa12.65□□□□□ -0.39
SMAD5-210ENST00000515005 ZNF840PA6NDX5 716 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 K7ENP7 123 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 CPLX1O14810 134 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 NEMFO60524 1076 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 OLFM2O95897 454 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 ACAT1P24752 427 aaKnown RBP12.64□□□□□ -0.39
SMAD5-210ENST00000515005 OXTRP30559 389 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 CTSKP43235 329 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 GRIA4P48058 902 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 EVCP57679 992 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 USP46P62068 366 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 STRN3Q13033 797 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 NR5A1Q13285 461 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 ECM1Q16610 540 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 PRAMEF14Q5SWL7 426 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 HIST2H2BCQ6DN03 193 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 GRAMD4Q6IC98 578 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 INO80CQ6PI98 192 aaPredicted RBP12.64□□□□□ -0.39
SMAD5-210ENST00000515005 TMEM25Q86YD3 366 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 CACTIN-AS1Q8N1I8 211 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 DCBLD1Q8N8Z6 715 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 FAM212AQ96EL1 285 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 PKMYT1Q99640 499 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 NUP58Q9BVL2 599 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 TRPM5Q9NZQ8 1165 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 GTF3C4Q9UKN8 822 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 SSUH2Q9Y2M2 353 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 PCDHB1Q9Y5F3 818 aa12.64□□□□□ -0.39
SMAD5-210ENST00000515005 A0A1B0GTQ1 180 aa12.63□□□□□ -0.39
SMAD5-210ENST00000515005 SFI1A8K8P3 1242 aa12.63□□□□□ -0.39
SMAD5-210ENST00000515005 DTNBO60941 627 aa12.63□□□□□ -0.39
SMAD5-210ENST00000515005 HIP1RO75146 1068 aa12.63□□□□□ -0.39
SMAD5-210ENST00000515005 MPOP05164 745 aa12.63□□□□□ -0.39
SMAD5-210ENST00000515005 ADRB2P07550 413 aa12.63□□□□□ -0.39
SMAD5-210ENST00000515005 TAF6P49848 677 aa12.63□□□□□ -0.39
SMAD5-210ENST00000515005 INSM1Q01101 510 aaPredicted RBP12.63□□□□□ -0.39
SMAD5-210ENST00000515005 MAPK7Q13164 816 aa12.63□□□□□ -0.39
SMAD5-210ENST00000515005 BLOC1S2Q6QNY1 142 aa12.63□□□□□ -0.39
SMAD5-210ENST00000515005 ZPBP2Q6X784 338 aa12.63□□□□□ -0.39
SMAD5-210ENST00000515005 KDM7AQ6ZMT4 941 aa12.63□□□□□ -0.39
SMAD5-210ENST00000515005 FAM124AQ86V42 546 aa12.63□□□□□ -0.39
SMAD5-210ENST00000515005 EID2Q8N6I1 236 aa12.63□□□□□ -0.39
SMAD5-210ENST00000515005 PSMG3-AS1Q96PY0 264 aa12.63□□□□□ -0.39
SMAD5-210ENST00000515005 TSPAN18Q96SJ8 248 aa12.63□□□□□ -0.39
SMAD5-210ENST00000515005 DPH1Q9BZG8 443 aa12.63□□□□□ -0.39
SMAD5-210ENST00000515005 CCSER1Q9C0I3 900 aa12.63□□□□□ -0.39
SMAD5-210ENST00000515005 C6orf106Q9H6K1 298 aaPredicted RBP12.63□□□□□ -0.39
SMAD5-210ENST00000515005 STARD5Q9NSY2 213 aa12.63□□□□□ -0.39
SMAD5-210ENST00000515005 DNAJC17Q9NVM6 304 aaKnown RBP12.63□□□□□ -0.39
SMAD5-210ENST00000515005 MYH11P35749 1972 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 GFRA2O00451 464 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 LAD1O00515 517 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 FAM189A1O60320 539 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 ABL1P00519 1130 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 OAS1P00973 400 aaKnown RBP12.62□□□□□ -0.39
SMAD5-210ENST00000515005 IGLV3-19P01714 112 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 MBL2P11226 248 aaPredicted RBP12.62□□□□□ -0.39
SMAD5-210ENST00000515005 RPS6KB1P23443 525 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 TMEM132DQ14C87 1099 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 INTS6LQ5JSJ4 861 aaKnown RBP12.62□□□□□ -0.39
SMAD5-210ENST00000515005 CACUL1Q86Y37 369 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 TMPRSS6Q8IU80 811 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 BBS7Q8IWZ6 715 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 SCFD1Q8WVM8 642 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 RFFLQ8WZ73 363 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 TNFRSF25Q93038 417 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 SIPA1Q96FS4 1042 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 OSGEPQ9NPF4 335 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 SPHK2Q9NRA0 654 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 SEPT3Q9UH03 358 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 MAN2B2Q9Y2E5 1009 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.62□□□□□ -0.39
SMAD5-210ENST00000515005 STON1Q9Y6Q2 735 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 FBN2P35556 2912 aa12.62□□□□□ -0.39
SMAD5-210ENST00000515005 CLEC18AA5D8T8 446 aa12.61□□□□□ -0.39
SMAD5-210ENST00000515005 KPNA7A9QM74 516 aa12.61□□□□□ -0.39
SMAD5-210ENST00000515005 HCRTO43612 131 aa12.61□□□□□ -0.39
SMAD5-210ENST00000515005 DFNA5O60443 496 aa12.61□□□□□ -0.39
SMAD5-210ENST00000515005 ITGAVP06756 1048 aa12.61□□□□□ -0.39
SMAD5-210ENST00000515005 ITGB6P18564 788 aa12.61□□□□□ -0.39
SMAD5-210ENST00000515005 STARD3Q14849 445 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms